Harnessing genomics to fast-track genetic improvement in aquaculture

RD Houston, TP Bean, DJ Macqueen… - Nature Reviews …, 2020 - nature.com
Aquaculture is the fastest-growing farmed food sector and will soon become the primary
source of fish and shellfish for human diets. In contrast to crop and livestock production …

Maturation in Atlantic salmon (Salmo salar, Salmonidae): a synthesis of ecological, genetic, and molecular processes

KB Mobley, T Aykanat, Y Czorlich, A House… - Reviews in Fish Biology …, 2021 - Springer
Over the past decades, Atlantic salmon (Salmo salar, Salmonidae) has emerged as a model
system for sexual maturation research, owing to the high diversity of life history strategies …

Advancing the protection of marine life through genomics

MJH Van Oppen, MA Coleman - PLoS Biology, 2022 - journals.plos.org
The rapid growth in genomic techniques provides the potential to transform how we protect,
manage, and conserve marine life. Further, solutions to boost the resilience of marine …

The future is now: Amplicon sequencing and sequence capture usher in the conservation genomics era

MH Meek, WA Larson - 2019 - Wiley Online Library
The genomics revolution has initiated a new era of population genetics where genome‐wide
data are frequently used to understand complex patterns of population structure and …

Aquatic landscape genomics and environmental effects on genetic variation

JA Grummer, LB Beheregaray, L Bernatchez… - Trends in ecology & …, 2019 - cell.com
Aquatic species represent a vast diversity of metazoans, provide humans with the most
abundant animal protein source, and are of increasing conservation concern, yet landscape …

The application gap: Genomics for biodiversity and ecosystem service management

M Heuertz, SB Carvalho, J Galindo, B Rinkevich… - Biological …, 2023 - Elsevier
The conservation of biodiversity from the genetic to the community levels is fundamental for
the continual provision of ecosystem services (ES), the benefits that ecosystems provide to …

Asymmetric oceanographic processes mediate connectivity and population genetic structure, as revealed by RAD seq, in a highly dispersive marine invertebrate …

A Xuereb, L Benestan, É Normandeau… - Molecular …, 2018 - Wiley Online Library
Marine populations are typically characterized by weak genetic differentiation due to the
potential for long‐distance dispersal favouring high levels of gene flow. However, strong …

A practical introduction to Random Forest for genetic association studies in ecology and evolution

MSO Brieuc, CD Waters, DP Drinan… - Molecular ecology …, 2018 - Wiley Online Library
Large genomic studies are becoming increasingly common with advances in sequencing
technology, and our ability to understand how genomic variation influences phenotypic …

Seascape genomics reveals adaptive divergence in a connected and commercially important mollusc, the greenlip abalone (Haliotis laevigata), along a longitudinal …

J Sandoval‐Castillo, NA Robinson, AM Hart… - Molecular …, 2018 - Wiley Online Library
Populations of broadcast spawning marine organisms often have large sizes and are
exposed to reduced genetic drift. Under such scenarios, strong selection associated with …

Twelve quick steps for genome assembly and annotation in the classroom

H Jung, T Ventura, JS Chung, WJ Kim… - PLoS computational …, 2020 - journals.plos.org
Eukaryotic genome sequencing and de novo assembly, once the exclusive domain of well-
funded international consortia, have become increasingly affordable, thus fitting the budgets …