Best practices in metabarcoding of fungi: from experimental design to results

L Tedersoo, M Bahram, L Zinger, RH Nilsson… - Molecular …, 2022 - Wiley Online Library
The development of high‐throughput sequencing (HTS) technologies has greatly improved
our capacity to identify fungi and unveil their ecological roles across a variety of ecosystems …

[HTML][HTML] Environmental DNA metabarcoding for benthic monitoring: A review of sediment sampling and DNA extraction methods

J Pawlowski, K Bruce, K Panksep, FI Aguirre… - Science of the Total …, 2022 - Elsevier
Environmental DNA (eDNA) metabarcoding (parallel sequencing of DNA/RNA for
identification of whole communities within a targeted group) is revolutionizing the field of …

FungalTraits: a user-friendly traits database of fungi and fungus-like stramenopiles

S Põlme, K Abarenkov, R Henrik Nilsson, BD Lindahl… - Fungal diversity, 2020 - Springer
The cryptic lifestyle of most fungi necessitates molecular identification of the guild in
environmental studies. Over the past decades, rapid development and affordability of …

[PDF][PDF] Fungi as mediators linking organisms and ecosystems

M Bahram, T Netherway - FEMS Microbiology Reviews, 2022 - academic.oup.com
Fungi form a major and diverse component of most ecosystems on Earth. They are both
micro and macroorganisms with high and varying functional diversity as well as great …

Photo-produced aromatic compounds stimulate microbial degradation of dissolved organic carbon in thermokarst lakes

J Hu, L Kang, Z Li, X Feng, C Liang, Z Wu… - Nature …, 2023 - nature.com
Photochemical and biological degradation of dissolved organic carbon (DOC) and their
interactions jointly contribute to the carbon dioxide released from surface waters in …

Freshwater fungi from karst landscapes in China and Thailand

J Yang, LL Liu, EBG Jones, KD Hyde, ZY Liu, DF Bao… - Fungal Diversity, 2023 - Springer
Freshwater fungi comprises a highly diverse group of organisms occurring in freshwater
habitats throughout the world. During a survey of freshwater fungi on submerged wood in …

A review on accessible techniques for removal of hexavalent Chromium and divalent Nickel from industrial wastewater: Recent research and future outlook

V Kumar, SK Dwivedi - Journal of Cleaner Production, 2021 - Elsevier
The present era is seeking our attention on the dilemma caused by the contamination of the
aquatic system with chromium (Cr) and nickel (Ni). Amid Ni and Cr oxidation states …

Characterizing the “fungal shunt”: Parasitic fungi on diatoms affect carbon flow and bacterial communities in aquatic microbial food webs

I Klawonn, S Van den Wyngaert… - Proceedings of the …, 2021 - National Acad Sciences
Microbial interactions in aquatic environments profoundly affect global biogeochemical
cycles, but the role of microparasites has been largely overlooked. Using a model …

Customized materials-assisted microorganisms in tumor therapeutics

QW Chen, JY Qiao, XH Liu, C Zhang… - Chemical Society …, 2021 - pubs.rsc.org
Microorganisms have been extensively applied as active biotherapeutic agents or drug
delivery vehicles for antitumor treatment because of their unparalleled bio-functionalities …

Algal blooms in the ocean: hot spots for chemically mediated microbial interactions

C Kuhlisch, A Shemi, N Barak-Gavish… - Nature Reviews …, 2024 - nature.com
The cycling of major nutrients in the ocean is affected by large-scale phytoplankton blooms,
which are hot spots of microbial life. Diverse microbial interactions regulate bloom dynamics …