A genotype-to-phenotype modeling framework to predict human pathogenicity of novel coronaviruses

P Davis, JA Russell - bioRxiv, 2021 - biorxiv.org
Leveraging prior viral genome sequencing data to make predictions on whether an
unknown, emergent virus harbors a 'phenotype-of-concern'has been a long-sought goal of …

Supplementary code data files for the thesis A Population-Based Approach to Genomic Island Analysis

KL Gray, C Bertelli, N Woods, AC Lim, KE Tilley… - 2023 - summit.sfu.ca
Bacteria are rich with functional diversity enhanced by their ability to readily adopt and
transmit novel traits via horizontal gene transfer. Genomic islands (GIs), defined as clusters …

THE USE OF MOLECULAR GENETIC METHODS BASED ON MLVA ANALYSIS TO CONFIRM THE UNIQUENESS OF COLLECTION STRAINS OF BRUCELLA

K Berdimuratova, E Shevtsova… - Eurasian Journal of …, 2022 - biotechlink.org
Collections of pathogenic bacterial cultures are necessary for the storage of commercially
valuable and typical strains for the purpose of patenting, production and testing of diagnostic …

[HTML][HTML] Key variables affecting genetic distance calculations in genomic epidemiology

F Coll - The Lancet Microbe, 2021 - thelancet.com
However, the bioinformatics methods used to analyse and interpret genomic data need to be
standardised and validated if genomic epidemiology is to be widely implemented and …

Strain diversity and relative transmission of Mycobacterium tuberculosis in south coastal Karnataka, India

K Chawla, A Kumar, VP Shenoy… - … of Tuberculosis and …, 2018 - ingentaconnect.com
BACKGROUND: There are no published reports on the strain diversity and relative
transmission of Mycobacterium tuberculosis isolates circulating in Karnataka State, India …

Genomic epidemiology of horizontal plasmid transfer among healthcare-associated bacterial pathogens in a tertiary hospital

DR Evans - 2021 - search.proquest.com
Healthcare-associated bacterial pathogens frequently carry plasmids that contribute to
antibiotic resistance and virulence. The horizontal transfer of plasmids between pathogens …

Relevance of PM in Infectious and Non-communicable Chronic Diseases and Pandemics

E Sarwar - Global Perspectives on Precision Medicine: Ethical …, 2023 - Springer
Precision medicine (PM) in the form of Pharmacogenomics (PGx) promises the use of
diagnostic testing to provide the best clinical decisions based on a patient's genetic profile …

[引用][C] Preventing and controlling outbreaks and AMR: From counting cases to monitoring risks

B Ingelbeen - 2023 - Utrecht University

[PDF][PDF] Probabilistic Methods for High-Resolution Metagenomics

T Mäklin - 2022 - helda.helsinki.fi
Metagenomics is the analysis of DNA sequencing data from samples obtained directly from
the environment and containing several different organisms at once. Common tasks in …

[图书][B] Characterization of SARS-CoV-2 introduction and spread in southern Wisconsin

GK Moreno - 2021 - search.proquest.com
The rapid worldwide spread of severe acute respiratory syndrome coronavirus 2 (SARS-
CoV-2) took the world by storm in early 2020, amassing over 153 million con-firmed cases …