Pan-cancer spatially resolved single-cell analysis reveals the crosstalk between cancer-associated fibroblasts and tumor microenvironment

C Ma, C Yang, A Peng, T Sun, X Ji, J Mi, L Wei… - Molecular Cancer, 2023 - Springer
Cancer-associated fibroblasts (CAFs) are a heterogeneous cell population that plays a
crucial role in remodeling the tumor microenvironment (TME). Here, through the integrated …

MacroH2A restricts inflammatory gene expression in melanoma cancer-associated fibroblasts by coordinating chromatin looping

D Filipescu, S Carcamo, A Agarwal, N Tung… - Nature Cell …, 2023 - nature.com
MacroH2A has established tumour suppressive functions in melanoma and other cancers,
but an unappreciated role in the tumour microenvironment. Using an autochthonous …

Spatial transcriptomics reveals distinct and conserved tumor core and edge architectures that predict survival and targeted therapy response

R Arora, C Cao, M Kumar, S Sinha, A Chanda… - Nature …, 2023 - nature.com
The spatial organization of the tumor microenvironment has a profound impact on biology
and therapy response. Here, we perform an integrative single-cell and spatial transcriptomic …

Emerging concepts in precision medicine in axial spondyloarthritis

H Allard-Chamard, Q Li, P Rahman - Current Rheumatology Reports, 2023 - Springer
Abstract Purpose of Review Axial spondyloarthritis (AxSpA) is among the rheumatology's
most heritable complex diseases, yet precision medicine at clinics still needs to be explored …

[HTML][HTML] Prolonged cytopenia following CD19 CAR T cell therapy is linked with bone marrow infiltration of clonally expanded IFNγ-expressing CD8 T cells

P Strati, X Li, Q Deng, ML Marques-Piubelli… - Cell Reports …, 2023 - cell.com
Autologous anti-CD19 chimeric antigen receptor T cell (CAR T) therapy is highly effective in
relapsed/refractory large B cell lymphoma (rrLBCL) but is associated with toxicities that …

Single-cell analysis in rheumatic and allergic diseases: insights for clinical practice

M Nishide, H Shimagami, A Kumanogoh - Nature Reviews Immunology, 2024 - nature.com
Since the advent of single-cell RNA sequencing (scRNA-seq) methodology, single-cell
analysis has become a powerful tool for exploration of cellular networks and dysregulated …

Dynamic mitochondrial transcription and translation in B cells control germinal center entry and lymphomagenesis

YF Yazicioglu, E Marin, C Sandhu, S Galiani… - Nature …, 2023 - nature.com
Germinal center (GC) B cells undergo proliferation at very high rates in a hypoxic
microenvironment but the cellular processes driving this are incompletely understood. Here …

Single-cell multi-omics analysis identifies two distinct phenotypes of newly-onset microscopic polyangiitis

M Nishide, K Nishimura, H Matsushita… - Nature …, 2023 - nature.com
The immunological basis of the clinical heterogeneity in autoimmune vasculitis remains
poorly understood. In this study, we conduct single-cell transcriptome analyses on …

Region-specific transcriptomic responses to obesity and diabetes in macaque hypothalamus

Y Lei, X Liang, Y Sun, T Yao, H Gong, Z Chen, Y Gao… - Cell metabolism, 2024 - cell.com
The hypothalamus plays a crucial role in the progression of obesity and diabetes; however,
its structural complexity and cellular heterogeneity impede targeted treatments. Here, we …

Integrating bulk and single-cell RNA sequencing data reveals the relationship between intratumor microbiome signature and host metabolic heterogeneity in breast …

F Chen, J Yang, Y Guo, D Su, Y Sheng… - Frontiers in …, 2023 - frontiersin.org
Introduction Nowadays, it has been recognized that gut microbiome can indirectly modulate
cancer susceptibility or progression. However, whether intratumor microbes are parasitic …