[HTML][HTML] Database resources of the national center for biotechnology information

EW Sayers, J Beck, EE Bolton, D Bourexis… - Nucleic acids …, 2021 - ncbi.nlm.nih.gov
Abstract The National Center for Biotechnology Information (NCBI) provides a large suite of
online resources for biological information and data, including the GenBank® nucleic acid …

[PDF][PDF] Review on epidermal growth factor receptor (EGFR) structure, signaling pathways, interactions, and recent updates of EGFR inhibitors

DA Sabbah, R Hajjo, K Sweidan - Current topics in medicinal …, 2020 - researchgate.net
The epidermal growth factor receptor (EGFR) belongs to the ERBB family of tyrosine kinase
receptors. EGFR signaling cascade is a key regulator in cell proliferation, differentiation …

Proksee: in-depth characterization and visualization of bacterial genomes

JR Grant, E Enns, E Marinier, A Mandal… - Nucleic acids …, 2023 - academic.oup.com
Abstract Proksee (https://proksee. ca) provides users with a powerful, easy-to-use, and
feature-rich system for assembling, annotating, analysing, and visualizing bacterial …

RefSeq: expanding the Prokaryotic Genome Annotation Pipeline reach with protein family model curation

W Li, KR O'Neill, DH Haft, M DiCuccio… - Nucleic acids …, 2021 - academic.oup.com
Abstract The Reference Sequence (RefSeq) project at the National Center for Biotechnology
Information (NCBI) contains nearly 200 000 bacterial and archaeal genomes and 150 …

[HTML][HTML] Biosynthetic potential of the global ocean microbiome

L Paoli, HJ Ruscheweyh, CC Forneris, F Hubrich… - Nature, 2022 - nature.com
Natural microbial communities are phylogenetically and metabolically diverse. In addition to
underexplored organismal groups, this diversity encompasses a rich discovery potential for …

tRNAscan-SE 2.0: improved detection and functional classification of transfer RNA genes

PP Chan, BY Lin, AJ Mak, TM Lowe - Nucleic acids research, 2021 - academic.oup.com
Abstract tRNAscan-SE has been widely used for transfer RNA (tRNA) gene prediction for
over twenty years, developed just as the first genomes were decoded. With the massive …

Bacteriophage-antibiotic combination therapy against extensively drug-resistant Pseudomonas aeruginosa infection to allow liver transplantation in a toddler

B Van Nieuwenhuyse, D Van der Linden… - Nature …, 2022 - nature.com
Post-operative bacterial infections are a leading cause of mortality and morbidity after
ongoing liver transplantation. Bacteria causing these infections in the hospital setting can …

DFAST: a flexible prokaryotic genome annotation pipeline for faster genome publication

Y Tanizawa, T Fujisawa, Y Nakamura - Bioinformatics, 2018 - academic.oup.com
We developed a prokaryotic genome annotation pipeline, DFAST, that also supports
genome submission to public sequence databases. DFAST was originally started as an on …

RefSeq: an update on prokaryotic genome annotation and curation

DH Haft, M DiCuccio, A Badretdin, V Brover… - Nucleic acids …, 2018 - academic.oup.com
Abstract The Reference Sequence (RefSeq) project at the National Center for Biotechnology
Information (NCBI) provides annotation for over 95 000 prokaryotic genomes that meet …

Bacteriophage targeting of gut bacterium attenuates alcoholic liver disease

YI Duan, C Llorente, S Lang, K Brandl, H Chu… - Nature, 2019 - nature.com
Chronic liver disease due to alcohol-use disorder contributes markedly to the global burden
of disease and mortality,–. Alcoholic hepatitis is a severe and life-threatening form of alcohol …