Where are the disease-associated eQTLs?

BD Umans, A Battle, Y Gilad - Trends in Genetics, 2021 - cell.com
Most disease-associated variants, although located in putatively regulatory regions, do not
have detectable effects on gene expression. One explanation could be that we have not …

Ancient DNA at the edge of the world: Continental immigration and the persistence of Neolithic male lineages in Bronze Age Orkney

K Dulias, MGB Foody, P Justeau… - Proceedings of the …, 2022 - National Acad Sciences
Orkney was a major cultural center during the Neolithic, 3800 to 2500 BC. Farming
flourished, permanent stone settlements and chambered tombs were constructed, and long …

Revealing the recent demographic history of Europe via haplotype sharing in the UK Biobank

E Gilbert, A Shanmugam… - Proceedings of the …, 2022 - National Acad Sciences
Haplotype-based analyses have recently been leveraged to interrogate the fine-scale
structure in specific geographic regions, notably in Europe, although an equivalent …

Genetic variability in COVID-19-related genes in the Brazilian population

R Secolin, TK de Araujo, MC Gonsales… - Human genome …, 2021 - nature.com
SARS-CoV-2 utilizes the angiotensin-converting enzyme 2 (ACE2) receptor and
transmembrane serine protease (TMPRSS2) to infect human lung cells. Previous studies …

Assortative mating and parental genetic relatedness contribute to the pathogenicity of variably expressive variants

C Smolen, M Jensen, L Dyer, L Pizzo… - The American Journal of …, 2023 - cell.com
We examined more than 97,000 families from four neurodevelopmental disease cohorts and
the UK Biobank to identify phenotypic and genetic patterns in parents contributing to …

Genome sequencing with gene panel-based analysis for rare inherited conditions in a publicly funded healthcare system: implications for future testing

LJ Hocking, C Andrews, C Armstrong… - European Journal of …, 2023 - nature.com
NHS genetics centres in Scotland sought to investigate the Genomics England 100,000
Genomes Project diagnostic utility to evaluate genome sequencing for in rare, inherited …

Whole-genome resequencing reveals genetic diversity and selection signals in warm temperate and subtropical Sillago sinica populations

X Zhao, T Zheng, T Gao, N Song - BMC genomics, 2023 - Springer
Background Genetic diversity and heterogeneous genomic signatures in marine fish
populations may result from selection pressures driven by the strong effects of …

Contribution of common risk variants to multiple sclerosis in Orkney and Shetland

CLK Barnes, C Hayward, DJ Porteous… - European Journal of …, 2021 - nature.com
Orkney and Shetland, the population isolates that make up the Northern Isles of Scotland,
are of particular interest to multiple sclerosis (MS) research. While MS prevalence is high in …

Testing for association with rare variants in the coding and non-coding genome: RAVA-FIRST, a new approach based on CADD deleteriousness score

O Bocher, TE Ludwig, MS Oglobinsky, G Marenne… - PLoS …, 2022 - journals.plos.org
Rare variant association tests (RVAT) have been developed to study the contribution of rare
variants widely accessible through high-throughput sequencing technologies. RVAT require …

Rare Missense Functional Variants at COL4A1 and COL4A2 in Sporadic Intracerebral Hemorrhage

J Chung, G Hamilton, M Kim, S Marini, B Montgomery… - Neurology, 2021 - AAN Enterprises
Objective To test the genetic contribution of rare missense variants in COL4A1 and COL4A2
in which common variants are genetically associated with sporadic intracerebral …