Species in lichen-forming fungi: balancing between conceptual and practical considerations, and between phenotype and phylogenomics

R Lücking, SD Leavitt, DL Hawksworth - Fungal Diversity, 2021 - Springer
Lichens are symbiotic associations resulting from interactions among fungi (primary and
secondary mycobionts), algae and/or cyanobacteria (primary and secondary photobionts) …

Unambiguous identification of fungi: where do we stand and how accurate and precise is fungal DNA barcoding?

R Lücking, MC Aime, B Robbertse, AN Miller… - IMA fungus, 2020 - Springer
True fungi (Fungi) and fungus-like organisms (eg Mycetozoa, Oomycota) constitute the
second largest group of organisms based on global richness estimates, with around 3 …

An overview of genomics, phylogenomics and proteomics approaches in Ascomycota

L Muggia, CG Ametrano, K Sterflinger, D Tesei - Life, 2020 - mdpi.com
Fungi are among the most successful eukaryotes on Earth: they have evolved strategies to
survive in the most diverse environments and stressful conditions and have been selected …

Providing scale to a known taxonomic unknown—At least a 70-fold increase in species diversity in a cosmopolitan nominal taxon of lichen-forming fungi

Y Zhang, J Clancy, J Jensen, RT McMullin, L Wang… - Journal of Fungi, 2022 - mdpi.com
Robust species delimitations provide a foundation for investigating speciation,
phylogeography, and conservation. Here we attempted to elucidate species boundaries in …

Species boundaries in the messy middle—A genome‐scale validation of species delimitation in a recently diverged lineage of coastal fog desert lichen fungi

J Jorna, JB Linde, PC Searle, AC Jackson… - Ecology and …, 2021 - Wiley Online Library
Species delimitation among closely related species is challenging because traditional
phenotype‐based approaches, for example, using morphology, ecological, or chemical …

[HTML][HTML] The fruticose genera in the Ramalinaceae (Ascomycota, Lecanoromycetes): their diversity and evolutionary history

R Spjut, A Simon, M Guissard, N Magain, E Sérusiaux - MycoKeys, 2020 - ncbi.nlm.nih.gov
We present phylogenetic analyses of the fruticose Ramalinaceae based on extensive
collections from many parts of the world, with a special focus on the Vizcaíno deserts in north …

Three challenges to contemporaneous taxonomy from a licheno-mycological perspective

R LÜCKING - Megataxa, 2020 - biotaxa.org
This paper discusses three issues that challenge contemporaneous taxonomy, with
examples from the fields of mycology and lichenology, formulated as three questions:(1) …

Circadian clock‐and temperature‐associated genes contribute to overall genomic differentiation along elevation in lichenized fungi

HF Valim, FD Grande, ELY Wong… - Molecular Ecology, 2024 - Wiley Online Library
Circadian regulation is linked to local environmental adaptation, and many species with
broad climatic niches display variation in circadian genes. Here, we hypothesize that …

An exception to the rule? Could photobiont identity be a better predictor of lichen phenotype than mycobiont identity?

J Steinová, H Holien, A Košuthová, P Škaloud - Journal of Fungi, 2022 - mdpi.com
With rare exceptions, the shape and appearance of lichen thalli are determined by the
fungal partner; thus, mycobiont identity is normally used for lichen identification. However, it …

Effects of dispersal strategy and migration history on genetic diversity and population structure of Antarctic lichens

E Lagostina, M Andreev, F Dal Grande… - Journal of …, 2021 - Wiley Online Library
Aim The homogenisation of historically isolated gene pools has been recognised as one of
the most serious conservation problems in the Antarctic. Lichens are the dominant …