Sequence-specific quantitation of mutagenic DNA damage via polymerase amplification with an artificial nucleotide

CMN Aloisi, A Nilforoushan, N Ziegler… - Journal of the American …, 2020 - ACS Publications
DNA mutations can result from replication errors due to different forms of DNA damage,
including low-abundance DNA adducts induced by reactions with electrophiles. The lack of …

Formic acid of ppm enhances LC-MS/MS detection of UV irradiation-induced DNA dimeric photoproducts

N Zhang, W Deng, Y Li, Y Ma, Y Liu, X Li… - Analytical …, 2019 - ACS Publications
Cyclobutane pyrimidine dimers (CPDs) and pyrimidine (6–4) pyrimidone photoproducts (6–
4PPs) are genotoxic DNA lesions and mainly generated on thymine–thymine (T–T) …

Quantitation of poly (ADP-ribose) by isotope dilution mass spectrometry

T Zubel, R Martello, A Bürkle, A Mangerich - Poly (ADP-Ribose) …, 2017 - Springer
Abstract Poly (ADP-ribosyl) ation (PARylation), ie, the formation of the nucleic acid-like
biopolymer poly (ADP-ribose)(PAR), is an essential posttranslational modification carried …

Human biomonitoring of DNA adducts by ion trap multistage mass spectrometry

J Guo, RJ Turesky - Current protocols in nucleic acid chemistry, 2016 - Wiley Online Library
Humans are continuously exposed to hazardous chemicals in the environment. These
chemicals or their electrophilic metabolites can form adducts with genomic DNA, which can …

A stable isotope dilution nanoflow liquid chromatography tandem mass spectrometry assay for the simultaneous detection and quantification of glyoxal-induced DNA …

HJC Chen, YL Chang, YC Teng, CF Hsiao… - Analytical …, 2017 - ACS Publications
Glyoxal (gx) is a bifunctional electrophile capable of cross-linking DNA. Although it is
present in foods and from the environment, endogenous formation of glyoxal occurs through …

Transition metal cations catalyze 16 O/18 O exchange of catechol motifs with H 2 18 O

R Hilgers, J Bijlsma, L Malacaria, JP Vincken… - Organic & …, 2022 - pubs.rsc.org
Catechol motifs are ubiquitous in nature, as part of plant, animal and microbial metabolites,
and are known to form complexes with various metal cations. Here, we report for the first …

DNA adduct profiles predict in vitro cell viability after treatment with the experimental anticancer prodrug pr104a

A Stornetta, PW Villalta, F Gossner… - Chemical research in …, 2017 - ACS Publications
PR104A is an experimental DNA-alkylating hypoxia-activated prodrug that can also be
activated in an oxygen-independent manner by the two-electron aldo-keto reductase 1C3 …

Alternative sampling strategies for the assessment of biomarkers of exposure

L Delahaye, B Janssens, C Stove - Current Opinion in Toxicology, 2017 - Elsevier
Biomarkers of exposure reflect the extent to which an individual has been exposed to a
particular agent. This review focuses on covalently modified endogenous molecules …

Biotransformation and toxicities of aristolochic acids

VS Sidorenko - Mechanisms of Genome Protection and Repair, 2020 - Springer
Environmental and iatrogenic exposures contribute significantly to human diseases,
including cancer. The list of known human carcinogens has recently been extended by the …

Quantitative Mass Spectrometry-Based Analysis of β-D-Glucosyl-5-Hydroxymethyluracil in Genomic DNA of Trypanosoma brucei

S Liu, D Ji, L Cliffe, R Sabatini… - Journal of the American …, 2014 - ACS Publications
β-D-glucosyl-5-hydroxymethyluracil (base J) is a hyper-modified nucleobase found in the
nuclear DNA of kinetoplastid parasites. With replacement of a fraction of thymine in DNA, J is …