Identifying key residues for protein allostery through rigid residue scan

R Kalescky, J Liu, P Tao - The Journal of Physical Chemistry A, 2015 - ACS Publications
Allostery is a ubiquitous process for protein regulatory activity in which a binding event can
change a protein's function carried out at a distal site. Despite intensive theoretical and …

Peptide targeting of PDZ-dependent interactions as pharmacological intervention in immune-related diseases

LH Gutiérrez-González, S Rivas-Fuentes… - Molecules, 2021 - mdpi.com
PDZ (postsynaptic density (PSD95), discs large (Dlg), and zonula occludens (ZO-1)-
dependent interactions are widely distributed within different cell types and regulate a …

PICK1 is implicated in organelle motility in an Arp2/3 complex–independent manner

Y Madasu, C Yang, M Boczkowska… - Molecular biology of …, 2015 - Am Soc Cell Biol
PICK1 is a modular scaffold implicated in synaptic receptor trafficking. It features a PDZ
domain, a BAR domain, and an acidic C-terminal tail (ACT). Analysis by small-angle x-ray …

Stereochemical determinants of C-terminal specificity in PDZ peptide-binding domains: a novel contribution of the carboxylate-binding loop

JF Amacher, PR Cushing, CD Bahl, T Beck… - Journal of Biological …, 2013 - ASBMB
PDZ (PSD-95/Dlg/ZO-1) binding domains often serve as cellular traffic engineers, controlling
the localization and activity of a wide variety of binding partners. As a result, they play …

Three Binding Conformations of BIO124 in the Pocket of the PICK1 PDZ Domain

AO Stevens, S Luo, Y He - Cells, 2022 - mdpi.com
The PDZ family has drawn attention as possible drug targets because of the domains' wide
ranges of function and highly conserved binding pockets. The PICK1 PDZ domain has been …

Structure–activity relationships of a small-molecule inhibitor of the PDZ domain of PICK1

A Bach, N Stuhr-Hansen, TS Thorsen, N Bork… - Organic & …, 2010 - pubs.rsc.org
Recently, we described the first small-molecule inhibitor,(E)-ethyl 2-cyano-3-(3, 4-
dichlorophenyl) acryloylcarbamate (1), of the PDZ domain of protein interacting with Cα …

Inhibition of PDZ domain-mediated interactions

D Grillo-Bosch, D Choquet, M Sainlos - Drug Discovery Today …, 2013 - Elsevier
Modulating protein–protein interactions constitutes a promising strategy both for the
investigation of biological mechanisms and for developing new therapeutic approaches …

Unconventional PDZ Recognition Revealed in α7 nAChR-PICK1 Complexes

V Bondarenko, Q Chen, TS Tillman, Y Xu… - ACS chemical …, 2024 - ACS Publications
PDZ domains are modular domains that conventionally bind to C terminal or internal motifs
of target proteins to control cellular functions through the regulation of protein complex …

Kinetics of ligand binding to membrane receptors from equilibrium fluctuation analysis of single binding events

A Gunnarsson, L Dexlin, P Wallin… - Journal of the …, 2011 - ACS Publications
Equilibrium fluctuation analysis of single binding events has been used to extract binding
kinetics of ligand interactions with cell-membrane bound receptors. Time-dependent total …

Differential trafficking of AMPA receptors following activation of NMDA receptors and mGluRs

TM Sanderson, GL Collingridge, SM Fitzjohn - Molecular brain, 2011 - Springer
The removal of AMPA receptors from synapses is a major component of long-term
depression (LTD). How this occurs, however, is still only partially understood. To investigate …