[HTML][HTML] DAE-CFR: detecting microRNA-disease associations using deep autoencoder and combined feature representation
Y Liu, R Zhang, X Dong, H Yang, J Li, H Cao, J Tian… - BMC …, 2024 - Springer
Background MicroRNA (miRNA) has been shown to play a key role in the occurrence and
progression of diseases, making uncovering miRNA-disease associations vital for disease …
progression of diseases, making uncovering miRNA-disease associations vital for disease …
[HTML][HTML] A holistic approach to understanding immune-mediated inflammatory diseases: bioinformatic tools to integrate omics data
Immune-mediated inflammatory diseases (IMIDs) comprise a complex group of pathologies
with diverse etiologies and clinical manifestations. In particular, omics technologies have …
with diverse etiologies and clinical manifestations. In particular, omics technologies have …
[HTML][HTML] MicroRNA Regulates Early-Life Stress–Induced Depressive Behavior via Serotonin Signaling in a Sex-Dependent Manner in the Prefrontal Cortex of Rats
LA McKibben, Y Dwivedi - Biological Psychiatry Global Open Science, 2021 - Elsevier
Background The underlying neurobiology of early-life stress (ELS)-induced major
depressive disorder is not clearly understood. Methods In this study, we used maternal …
depressive disorder is not clearly understood. Methods In this study, we used maternal …
Leveraging distributed biomedical knowledge sources to discover novel uses for known drugs
F Womack, J McClelland, D Koslicki - bioRxiv, 2019 - biorxiv.org
Computational drug repurposing, also called drug repositioning, is a low cost, promising tool
for finding new uses for existing drugs. With the continued growth of repositories of …
for finding new uses for existing drugs. With the continued growth of repositories of …
[HTML][HTML] MicroRNAs regulate metabolic phenotypes during multicellular tumor spheroids progression
EA Mucino-Olmos, A Vazquez-Jimenez… - Frontiers in …, 2020 - frontiersin.org
During tumor progression, cancer cells rewire their metabolism to face their bioenergetic
demands. In recent years, microRNAs (miRNAs) have emerged as regulatory elements that …
demands. In recent years, microRNAs (miRNAs) have emerged as regulatory elements that …
Comprehensive overview and assessment of microRNA target prediction tools in Homo sapiens and Drosophila melanogaster
Background: MicroRNAs (miRNAs) are small non-coding RNAs that control gene expression
at the post-transcriptional level through complementary base pairing with the target mRNA …
at the post-transcriptional level through complementary base pairing with the target mRNA …
Downregulation of specific FBXW7 isoforms with differential effects in T-cell lymphoblastic lymphoma
I Vázquez-Domínguez, L González-Sánchez… - Oncogene, 2019 - nature.com
FBXW7 is a driver gene in T-cell lymphoblastic neoplasia acting through proteasome
degradation of key proto-oncogenes. FBXW7 encodes three isoforms, α, β and γ, which …
degradation of key proto-oncogenes. FBXW7 encodes three isoforms, α, β and γ, which …
IRNdb: the database of immunologically relevant non-coding RNAs
Abstract MicroRNAs (miRNAs), long non-coding RNAs (lncRNAs) and other functional non-
coding RNAs (ncRNAs) have emerged as pivotal regulators involved in multiple biological …
coding RNAs (ncRNAs) have emerged as pivotal regulators involved in multiple biological …
miRNA, siRNA, and lncRNA: Recent Development of Bioinformatics Tools and Databases in Support of Combating Different Diseases
C Chakraborty, M Bhattacharya… - Current …, 2024 - ingentaconnect.com
Today, the bioinformatics tool and database development are one of the most significant
research areas in computational biology. Computational biologists are developing diverse …
research areas in computational biology. Computational biologists are developing diverse …
MIO: microRNA target analysis system for immuno-oncology
P Monfort-Lanzas, R Gronauer, L Madersbacher… - …, 2022 - academic.oup.com
MicroRNAs have been shown to be able to modulate the tumor microenvironment and the
immune response and hence could be interesting biomarkers and therapeutic targets in …
immune response and hence could be interesting biomarkers and therapeutic targets in …