Metabolic enzymes enjoying new partnerships as RNA-binding proteins

A Castello, MW Hentze, T Preiss - Trends in Endocrinology & Metabolism, 2015 - cell.com
In the past century, few areas of biology advanced as much as our understanding of the
pathways of intermediary metabolism. Initially considered unimportant in terms of gene …

Global analysis of yeast mRNPs

SF Mitchell, S Jain, M She, R Parker - Nature structural & molecular …, 2013 - nature.com
Proteins regulate gene expression by controlling mRNA biogenesis, localization, translation
and decay. Identifying the composition, diversity and function of mRNA–protein complexes …

The new (dis) order in RNA regulation

AI Järvelin, M Noerenberg, I Davis… - Cell Communication and …, 2016 - Springer
RNA-binding proteins play a key role in the regulation of all aspects of RNA metabolism,
from the synthesis of RNA to its decay. Protein-RNA interactions have been thought to be …

Transcriptome-wide discovery of coding and noncoding RNA-binding proteins

R Huang, M Han, L Meng… - Proceedings of the …, 2018 - National Acad Sciences
Transcriptome-wide identification of RNA-binding proteins (RBPs) is a prerequisite for
understanding the posttranscriptional gene regulation networks. However, proteomic …

Dissecting the expression landscape of RNA-binding proteins in human cancers

B Kechavarzi, SC Janga - Genome biology, 2014 - Springer
Background RNA-binding proteins (RBPs) play important roles in cellular homeostasis by
controlling gene expression at the post-transcriptional level. Results We explore the …

Quantitative analysis of RNA-protein interactions on a massively parallel array reveals biophysical and evolutionary landscapes

JD Buenrostro, CL Araya, LM Chircus, CJ Layton… - Nature …, 2014 - nature.com
RNA-protein interactions drive fundamental biological processes and are targets for
molecular engineering, yet quantitative and comprehensive understanding of the sequence …

RNA-binding proteins in Mendelian disease

A Castello, B Fischer, MW Hentze, T Preiss - Trends in Genetics, 2013 - cell.com
RNA-binding proteins (RBPs) control all aspects of RNA fate, and defects in their function
underlie a broad spectrum of human pathologies. We focus here on two recent studies that …

SONAR discovers RNA-binding proteins from analysis of large-scale protein-protein interactomes

KW Brannan, W Jin, SC Huelga, CAS Banks… - Molecular cell, 2016 - cell.com
RNA metabolism is controlled by an expanding, yet incomplete, catalog of RNA-binding
proteins (RBPs), many of which lack characterized RNA binding domains. Approaches to …

Conserved mRNA-binding proteomes in eukaryotic organisms

AM Matia-González, EE Laing, AP Gerber - Nature structural & …, 2015 - nature.com
RNA-binding proteins (RBPs) are essential for post-transcriptional regulation of gene
expression. Recent high-throughput screens have dramatically increased the number of …

System-wide identification of RNA-binding proteins by interactome capture

A Castello, R Horos, C Strein, B Fischer… - Nature protocols, 2013 - nature.com
Owing to their preeminent biological functions, the repertoire of expressed RNA-binding
proteins (RBPs) and their activity states are highly informative about cellular systems. We …