Repeat-based holocentromeres influence genome architecture and karyotype evolution
The centromere represents a single region in most eukaryotic chromosomes. However,
several plant and animal lineages assemble holocentromeres along the entire chromosome …
several plant and animal lineages assemble holocentromeres along the entire chromosome …
Taxon-specific, phased siRNAs underlie a speciation locus in monkeyflowers
Taxon-specific small RNA loci are widespread in eukaryotic genomes, yet their role in
lineage-specific adaptation, phenotypic diversification, and speciation is poorly understood …
lineage-specific adaptation, phenotypic diversification, and speciation is poorly understood …
PLAZA 4.0: an integrative resource for functional, evolutionary and comparative plant genomics
Abstract PLAZA (https://bioinformatics. psb. ugent. be/plaza) is a plant-oriented online
resource for comparative, evolutionary and functional genomics. The PLAZA platform …
resource for comparative, evolutionary and functional genomics. The PLAZA platform …
A collinearity-incorporating homology inference strategy for connecting emerging assemblies in the triticeae tribe as a pilot practice in the plant pangenomic era
Plant genome sequencing has dramatically increased, and some species even have
multiple high-quality reference versions. Demands for clade-specific homology inference …
multiple high-quality reference versions. Demands for clade-specific homology inference …
Genome assemblies of 11 bamboo species highlight diversification induced by dynamic subgenome dominance
Polyploidy (genome duplication) is a pivotal force in evolution. However, the interactions
between parental genomes in a polyploid nucleus, frequently involving subgenome …
between parental genomes in a polyploid nucleus, frequently involving subgenome …
Genome sequence of cultivated Upland cotton (Gossypium hirsutum TM-1) provides insights into genome evolution
Gossypium hirsutum has proven difficult to sequence owing to its complex allotetraploid
(AtDt) genome. Here we produce a draft genome using 181-fold paired-end sequences …
(AtDt) genome. Here we produce a draft genome using 181-fold paired-end sequences …
Telomere-to-telomere gapless chromosomes of banana using nanopore sequencing
Long-read technologies hold the promise to obtain more complete genome assemblies and
to make them easier. Coupled with long-range technologies, they can reveal the architecture …
to make them easier. Coupled with long-range technologies, they can reveal the architecture …
Allele-aware chromosome-level genome assembly of Artemisia annua reveals the correlation between ADS expansion and artemisinin yield
B Liao, X Shen, L Xiang, S Guo, S Chen, Y Meng… - Molecular plant, 2022 - cell.com
Artemisia annua is the major natural source of artemisinin, an anti-malarial medicine
commonly used worldwide. Here, we present chromosome-level haploid maps for two A …
commonly used worldwide. Here, we present chromosome-level haploid maps for two A …
The sterlet sturgeon genome sequence and the mechanisms of segmental rediploidization
Sturgeons seem to be frozen in time. The archaic characteristics of this ancient fish lineage
place it in a key phylogenetic position at the base of the~ 30,000 modern teleost fish …
place it in a key phylogenetic position at the base of the~ 30,000 modern teleost fish …
Expansion within the CYP71D subfamily drives the heterocyclization of tanshinones synthesis in Salvia miltiorrhiza
Y Ma, G Cui, T Chen, X Ma, R Wang, B Jin… - Nature …, 2021 - nature.com
Tanshinones are the bioactive nor-diterpenoid constituents of the Chinese medicinal herb
Danshen (Salvia miltiorrhiza). These groups of chemicals have the characteristic furan D …
Danshen (Salvia miltiorrhiza). These groups of chemicals have the characteristic furan D …