Transposable elements orchestrate subgenome-convergent and-divergent transcription in common wheat
Y Zhang, Z Li, J Liu, Y Zhang, L Ye, Y Peng… - Nature …, 2022 - nature.com
The success of common wheat as a global staple crop was largely attributed to its genomic
diversity and redundancy due to the merge of different genomes, giving rise to the major …
diversity and redundancy due to the merge of different genomes, giving rise to the major …
Near-gapless and haplotype-resolved apple genomes provide insights into the genetic basis of rootstock-induced dwarfing
W Li, C Chu, H Li, H Zhang, H Sun, S Wang, Z Wang… - Nature Genetics, 2024 - nature.com
Dwarfing rootstocks have transformed the production of cultivated apples; however, the
genetic basis of rootstock-induced dwarfing remains largely unclear. We have assembled …
genetic basis of rootstock-induced dwarfing remains largely unclear. We have assembled …
Biased Gene Fractionation and Dominant Gene Expression among the Subgenomes of Brassica rapa
Polyploidization, both ancient and recent, is frequent among plants. A “two-step theory" was
proposed to explain the meso-triplication of the Brassica “A" genome: Brassica rapa. By …
proposed to explain the meso-triplication of the Brassica “A" genome: Brassica rapa. By …
Genome-wide identification and expression profiling analysis of maize AP2/ERF superfamily genes reveal essential roles in abiotic stress tolerance
J Zhang, J Liao, Q Ling, Y Xi, Y Qian - BMC genomics, 2022 - Springer
Background As one of the largest transcription factor families in plants, the
APETALA2/Ethylene-Responsive Factor (AP2/ERF) superfamily is involved in various …
APETALA2/Ethylene-Responsive Factor (AP2/ERF) superfamily is involved in various …
[图书][B] Molecular plant breeding
Y Xu - 2010 - books.google.com
Recent advances in plant genomics and molecular biology have revolutionized our
understanding of plant genetics, providing new opportunities for more efficient and …
understanding of plant genetics, providing new opportunities for more efficient and …
AnchorWave: Sensitive alignment of genomes with high sequence diversity, extensive structural polymorphism, and whole-genome duplication
Millions of species are currently being sequenced, and their genomes are being compared.
Many of them have more complex genomes than model systems and raise novel challenges …
Many of them have more complex genomes than model systems and raise novel challenges …
SyMAP v3. 4: a turnkey synteny system with application to plant genomes
C Soderlund, M Bomhoff, WM Nelson - Nucleic acids research, 2011 - academic.oup.com
Abstract SyMAP (Synteny Mapping and Analysis Program) was originally developed to
compute synteny blocks between a sequenced genome and a FPC map, and has been …
compute synteny blocks between a sequenced genome and a FPC map, and has been …
Finding and comparing syntenic regions among Arabidopsis and the outgroups papaya, poplar, and grape: CoGe with rosids
E Lyons, B Pedersen, J Kane, M Alam, R Ming… - Plant …, 2008 - academic.oup.com
In addition to the genomes of Arabidopsis (Arabidopsis thaliana) and poplar (Populus
trichocarpa), two near-complete rosid genome sequences, grape (Vitis vinifera) and papaya …
trichocarpa), two near-complete rosid genome sequences, grape (Vitis vinifera) and papaya …
Mikania micrantha genome provides insights into the molecular mechanism of rapid growth
BO Liu, J Yan, W Li, L Yin, P Li, H Yu, L Xing… - Nature …, 2020 - nature.com
Mikania micrantha is one of the top 100 worst invasive species that can cause serious
damage to natural ecosystems and substantial economic losses. Here, we present its 1.79 …
damage to natural ecosystems and substantial economic losses. Here, we present its 1.79 …
The phased telomere-to-telomere reference genome of Musa acuminata, a main contributor to banana cultivars
Musa acuminata is a main wild contributor to banana cultivars. Here, we reported a
haplotype-resolved and telomere-to-telomere reference genome of M. acuminata by …
haplotype-resolved and telomere-to-telomere reference genome of M. acuminata by …