[PDF][PDF] CRISPR-based genome editing through the lens of DNA repair
Genome editing technologies operate by inducing site-specific DNA perturbations that are
resolved by cellular DNA repair pathways. Products of genome editors include DNA breaks …
resolved by cellular DNA repair pathways. Products of genome editors include DNA breaks …
[HTML][HTML] Genome editing in bacteria: CRISPR-Cas and beyond
RD Arroyo-Olarte, R Bravo Rodriguez, E Morales-Ríos - Microorganisms, 2021 - mdpi.com
Genome editing in bacteria encompasses a wide array of laborious and multi-step methods
such as suicide plasmids. The discovery and applications of clustered regularly interspaced …
such as suicide plasmids. The discovery and applications of clustered regularly interspaced …
[PDF][PDF] Bacteriophages inhibit and evade cGAS-like immune function in bacteria
E Huiting, X Cao, J Ren, JS Athukoralage, Z Luo… - Cell, 2023 - cell.com
A fundamental strategy of eukaryotic antiviral immunity involves the cGAS enzyme, which
synthesizes 2′, 3′-cGAMP and activates the effector STING. Diverse bacteria contain …
synthesizes 2′, 3′-cGAMP and activates the effector STING. Diverse bacteria contain …
[HTML][HTML] Emergent CRISPR–Cas-based technologies for engineering non-model bacteria
Highlights•CRISPR–Cas systems promoted the engineering of non-model bacteria.•Tools
include genome modifications and finely-tuned transcriptional regulation.•CRISPR–Cas …
include genome modifications and finely-tuned transcriptional regulation.•CRISPR–Cas …
[PDF][PDF] Cas11 enables genome engineering in human cells with compact CRISPR-Cas3 systems
Leading CRISPR-Cas technologies employ Cas9 and Cas12 enzymes that generate RNA-
guided dsDNA breaks. Yet, the most abundant microbial adaptive immune systems, Type I …
guided dsDNA breaks. Yet, the most abundant microbial adaptive immune systems, Type I …
[PDF][PDF] Phage-delivered CRISPR-Cas9 for strain-specific depletion and genomic deletions in the gut microbiome
KN Lam, P Spanogiannopoulos, P Soto-Perez… - Cell Reports, 2021 - cell.com
Mechanistic insights into the role of the human microbiome in the predisposition to and
treatment of disease are limited by the lack of methods to precisely add or remove microbial …
treatment of disease are limited by the lack of methods to precisely add or remove microbial …
[PDF][PDF] Allosteric control of type IA CRISPR-Cas3 complexes and establishment as effective nucleic acid detection and human genome editing tools
Summary Type I CRISPR-Cas systems typically rely on a two-step process to degrade DNA.
First, an RNA-guided complex named Cascade identifies the complementary DNA target …
First, an RNA-guided complex named Cascade identifies the complementary DNA target …
[HTML][HTML] A Cas3-base editing tool for targetable in vivo mutagenesis
A Zimmermann, JE Prieto-Vivas, C Cautereels… - Nature …, 2023 - nature.com
The generation of genetic diversity via mutagenesis is routinely used for protein engineering
and pathway optimization. Current technologies for random mutagenesis often target either …
and pathway optimization. Current technologies for random mutagenesis often target either …
Improvement of soybean; A way forward transition from genetic engineering to new plant breeding technologies
Soybean is considered one of the important crops among legumes. Due to high nutritional
contents in seed (proteins, sugars, oil, fatty acids, and amino acids), soybean is used …
contents in seed (proteins, sugars, oil, fatty acids, and amino acids), soybean is used …
Mobile element warfare via CRISPR and anti-CRISPR in Pseudomonas aeruginosa
Bacteria deploy multiple defenses to prevent mobile genetic element (MGEs) invasion.
CRISPR–Cas immune systems use RNA-guided nucleases to target MGEs, which counter …
CRISPR–Cas immune systems use RNA-guided nucleases to target MGEs, which counter …