Clinical sequencing: is WGS the better WES?
J Meienberg, R Bruggmann, K Oexle, G Matyas - Human genetics, 2016 - Springer
Current clinical next-generation sequencing is done by using gene panels and exome
analysis, both of which involve selective capturing of target regions. However, capturing has …
analysis, both of which involve selective capturing of target regions. However, capturing has …
Comparison of exome and genome sequencing technologies for the complete capture of protein‐coding regions
For next‐generation sequencing technologies, sufficient base‐pair coverage is the foremost
requirement for the reliable detection of genomic variants. We investigated whether whole …
requirement for the reliable detection of genomic variants. We investigated whether whole …
Low-pass whole-genome sequencing in clinical cytogenetics: a validated approach
Z Dong, J Zhang, P Hu, H Chen, J Xu, Q Tian… - Genetics in …, 2016 - nature.com
Purpose: Chromosomal microarray analysis is the gold standard for copy-number variant
(CNV) detection in prenatal and postnatal diagnosis. We aimed to determine whether next …
(CNV) detection in prenatal and postnatal diagnosis. We aimed to determine whether next …
LAGOS-NE: a multi-scaled geospatial and temporal database of lake ecological context and water quality for thousands of US lakes
PA Soranno, LC Bacon, M Beauchene, KE Bednar… - …, 2017 - academic.oup.com
Understanding the factors that affect water quality and the ecological services provided by
freshwater ecosystems is an urgent global environmental issue. Predicting how water quality …
freshwater ecosystems is an urgent global environmental issue. Predicting how water quality …
On the core segmentation algorithms of copy number variation detection tools
Y Zhang, W Liu, J Duan - Briefings in Bioinformatics, 2024 - academic.oup.com
Shotgun sequencing is a high-throughput method used to detect copy number variants
(CNVs). Although there are numerous CNV detection tools based on shotgun sequencing …
(CNVs). Although there are numerous CNV detection tools based on shotgun sequencing …
Copy number analysis of whole-genome data using BIC-seq2 and its application to detection of cancer susceptibility variants
Whole-genome sequencing data allow detection of copy number variation (CNV) at high
resolution. However, estimation based on read coverage along the genome suffers from …
resolution. However, estimation based on read coverage along the genome suffers from …
Approach to genetic diagnosis of inborn errors of immunity through next-generation sequencing
Patients with inborn errors of immunity (IEI) present with a heterogeneous clinical and
immunological phenotype, therefore a correct molecular diagnosis is crucial for the …
immunological phenotype, therefore a correct molecular diagnosis is crucial for the …
An integrated framework for discovery and genotyping of genomic variants from high-throughput sequencing experiments
Recent advances in high-throughput sequencing (HTS) technologies and computing
capacity have produced unprecedented amounts of genomic data that have unraveled the …
capacity have produced unprecedented amounts of genomic data that have unraveled the …
CNVcaller: highly efficient and widely applicable software for detecting copy number variations in large populations
Background The increasing amount of sequencing data available for a wide variety of
species can be theoretically used for detecting copy number variations (CNVs) at the …
species can be theoretically used for detecting copy number variations (CNVs) at the …
Copy‐number analysis by base‐level normalization: An intuitive visualization tool for evaluating copy number variations
H Kim, Y Shim, TG Lee, D Won, JR Choi… - Clinical …, 2023 - Wiley Online Library
Next‐generation sequencing (NGS) facilitates comprehensive molecular analyses that help
with diagnosing unsolved disorders. In addition to detecting single‐nucleotide variations …
with diagnosing unsolved disorders. In addition to detecting single‐nucleotide variations …