Fungal identification using molecular tools: a primer for the natural products research community
Fungi are morphologically, ecologically, metabolically, and phylogenetically diverse. They
are known to produce numerous bioactive molecules, which makes them very useful for …
are known to produce numerous bioactive molecules, which makes them very useful for …
Fungal community analysis by high‐throughput sequencing of amplified markers–a user's guide
BD Lindahl, RH Nilsson, L Tedersoo… - New …, 2013 - Wiley Online Library
Novel high‐throughput sequencing methods outperform earlier approaches in terms of
resolution and magnitude. They enable identification and relative quantification of …
resolution and magnitude. They enable identification and relative quantification of …
[HTML][HTML] Unambiguous identification of fungi: where do we stand and how accurate and precise is fungal DNA barcoding?
True fungi (Fungi) and fungus-like organisms (eg Mycetozoa, Oomycota) constitute the
second largest group of organisms based on global richness estimates, with around 3 …
second largest group of organisms based on global richness estimates, with around 3 …
Accurate estimation of fungal diversity and abundance through improved lineage-specific primers optimized for Illumina amplicon sequencing
While high-throughput sequencing methods are revolutionizing fungal ecology, recovering
accurate estimates of species richness and abundance has proven elusive. We sought to …
accurate estimates of species richness and abundance has proven elusive. We sought to …
[HTML][HTML] Assessment of BOLD and GenBank–Their accuracy and reliability for the identification of biological materials
KA Meiklejohn, N Damaso, JM Robertson - PloS one, 2019 - journals.plos.org
Taxonomic identification of biological materials can be achieved through DNA barcoding,
where an unknown “barcode” sequence is compared to a reference database. In many …
where an unknown “barcode” sequence is compared to a reference database. In many …
Nuclear ribosomal internal transcribed spacer (ITS) region as a universal DNA barcode marker for Fungi
CL Schoch, KA Seifert, S Huhndorf… - Proceedings of the …, 2012 - National Acad Sciences
Six DNA regions were evaluated as potential DNA barcodes for Fungi, the second largest
kingdom of eukaryotic life, by a multinational, multilaboratory consortium. The region of the …
kingdom of eukaryotic life, by a multinational, multilaboratory consortium. The region of the …
The sooty moulds
P Chomnunti, S Hongsanan, B Aguirre-Hudson, Q Tian… - Fungal diversity, 2014 - Springer
Sooty moulds are a remarkable, but poorly understood group of fungi. They coat fruits and
leaves superficially with black mycelia, which reduces photosynthesis rates of host plants …
leaves superficially with black mycelia, which reduces photosynthesis rates of host plants …
[HTML][HTML] ITS alchemy: on the use of ITS as a DNA marker in fungal ecology
H Kauserud - Fungal Ecology, 2023 - Elsevier
High throughput sequencing of PCR amplicons derived from environmental DNA (aka DNA
metabarcoding) has become an integral part of fungal ecology, enabling in-depth …
metabarcoding) has become an integral part of fungal ecology, enabling in-depth …
Forgotten fungi—the gut mycobiome in human health and disease
The human body is home to a complex and diverse microbial ecosystem that plays a central
role in host health. This includes a diversity of fungal species that is collectively referred to …
role in host health. This includes a diversity of fungal species that is collectively referred to …
Rhizoctonia solani: taxonomy, population biology and management of rhizoctonia seedling disease of soybean
OO Ajayi‐Oyetunde, CA Bradley - Plant pathology, 2018 - Wiley Online Library
Rhizoctonia solani, the most important species within the genus Rhizoctonia, is a soilborne
plant pathogen with considerable diversity in cultural morphology, host range and …
plant pathogen with considerable diversity in cultural morphology, host range and …