Finding evolutionary processes hidden in cryptic species
Cryptic species could represent a substantial fraction of biodiversity. However, inconsistent
definitions and taxonomic treatment of cryptic species prevent informed estimates of their …
definitions and taxonomic treatment of cryptic species prevent informed estimates of their …
Lost in parameter space: a road map for stacks
JR Paris, JR Stevens… - Methods in Ecology and …, 2017 - Wiley Online Library
Restriction site‐Associated DNA sequencing (RAD‐seq) has become a widely adopted
method for genotyping populations of model and non‐model organisms. Generating a …
method for genotyping populations of model and non‐model organisms. Generating a …
Gene flow creates a mirage of cryptic species in a Southeast Asian spotted stream frog complex
Most new cryptic species are described using conventional tree‐and distance‐based
species delimitation methods (SDMs), which rely on phylogenetic arrangements and …
species delimitation methods (SDMs), which rely on phylogenetic arrangements and …
[HTML][HTML] Cryptic Clitellata: Molecular species delimitation of clitellate worms (Annelida): An overview
S Martinsson, C Erséus - Diversity, 2021 - mdpi.com
Methods for species delimitation using molecular data have developed greatly and have
become a staple in systematic studies of clitellate worms. Here we give a historical overview …
become a staple in systematic studies of clitellate worms. Here we give a historical overview …
“Ghost introgression” as a cause of deep mitochondrial divergence in a bird species complex
D Zhang, L Tang, Y Cheng, Y Hao… - Molecular Biology …, 2019 - academic.oup.com
In the absence of nuclear-genomic differentiation between two populations, deep
mitochondrial divergence (DMD) is a form of mito-nuclear discordance. Such instances of …
mitochondrial divergence (DMD) is a form of mito-nuclear discordance. Such instances of …
Causes and analytical impacts of missing data in RADseq phylogenetics: Insights from an African frog (Afrixalus)
Restriction site‐associated DNA sequencing (RADseq) has emerged as a useful tool in
systematics and population genomics. A common feature of RADseq data sets is that they …
systematics and population genomics. A common feature of RADseq data sets is that they …
Cryptic speciation and limited hybridization within Lumbricus earthworms (Clitellata: Lumbricidae)
S Martinsson, C Erséus - Molecular Phylogenetics and Evolution, 2017 - Elsevier
Cryptic mitochondrial (mt) lineages are known to exist in the earthworm morphospecies
Lumbricus rubellus and L. terrestris. The latter was recently split into two species, L. terrestris …
Lumbricus rubellus and L. terrestris. The latter was recently split into two species, L. terrestris …
[HTML][HTML] Extreme mitochondrial DNA divergence underlies genetic conflict over sex determination
Cytoplasmic male sterility (CMS) is a form of genetic conflict over sex determination that
results from differences in modes of inheritance between genomic compartments. 1–3 …
results from differences in modes of inheritance between genomic compartments. 1–3 …
Cryptic genetic lineages in Eisenia nordenskioldi pallida (Oligochaeta, Lumbricidae)
SV Shekhovtsov, DI Berman, NE Bazarova… - European Journal of Soil …, 2016 - Elsevier
Eisenia nordenskioldi pallida Malevič 1956 (Lumbricidae, Annelida) is widely distributed in
various climatic zones of Northern Asia. To study its genetic variation, we collected …
various climatic zones of Northern Asia. To study its genetic variation, we collected …
Genome-informed integrative taxonomic description of three cryptic species in the earthworm genus Carpetania (Oligochaeta, Hormogastridae)
Research on cryptic species complexes has reached a consensus on the necessity of
integrating multiple sources of evidence. Reduced representation library techniques such as …
integrating multiple sources of evidence. Reduced representation library techniques such as …