[HTML][HTML] Genomic context of NTRK1/2/3 fusion-positive tumours from a large real-world population

CB Westphalen, MG Krebs, C Le Tourneau… - NPJ precision …, 2021 - nature.com
Neurotrophic tropomyosin receptor kinase (NTRK) gene fusions are rare oncogenic drivers
in solid tumours. This study aimed to interrogate a large real-world database of …

Systematic profiling of conditional pathway activation identifies context-dependent synthetic lethalities

L Chang, NY Jung, A Atari, DJ Rodriguez, D Kesar… - Nature Genetics, 2023 - nature.com
The paradigm of cancer-targeted therapies has focused largely on inhibition of critical
pathways in cancer. Conversely, conditional activation of signaling pathways as a new …

[HTML][HTML] Prevalence and mutational determinants of high tumor mutation burden in breast cancer

R Barroso-Sousa, E Jain, O Cohen, D Kim… - Annals of …, 2020 - Elsevier
Background High tumor mutation burden (TMB) can benefit immunotherapy for multiple
tumor types, but the prevalence of hypermutated breast cancer is not well described. The …

Mutational processes shape the landscape of TP53 mutations in human cancer

AO Giacomelli, X Yang, RE Lintner, JM McFarland… - Nature …, 2018 - nature.com
Unlike most tumor suppressor genes, the most common genetic alterations in tumor protein
p53 (TP53) are missense mutations,. Mutant p53 protein is often abundantly expressed in …

[HTML][HTML] The evolving landscape of biomarker testing for non-small cell lung cancer in Europe

KM Kerr, F Bibeau, E Thunnissen, J Botling, A Ryška… - Lung Cancer, 2021 - Elsevier
The discovery of oncogenic driver mutations rendering non-small cell lung cancer (NSCLC)
targetable by small-molecule inhibitors, and the development of immunotherapies, have …

Rare molecular subtypes of lung cancer

G Harada, SR Yang, E Cocco, A Drilon - Nature Reviews Clinical …, 2023 - nature.com
Oncogenes that occur in≤ 5% of non-small-cell lung cancers have been defined as 'rare';
nonetheless, this frequency can correspond to a substantial number of patients diagnosed …

The emerging clinical relevance of genomics in cancer medicine

MF Berger, ER Mardis - Nature reviews Clinical oncology, 2018 - nature.com
The combination of next-generation sequencing and advanced computational data analysis
approaches has revolutionized our understanding of the genomic underpinnings of cancer …

Genetic analysis of 779 advanced differentiated and anaplastic thyroid cancers

N Pozdeyev, LM Gay, ES Sokol, R Hartmaier… - Clinical Cancer …, 2018 - AACR
Purpose: To define the genetic landscape of advanced differentiated and anaplastic thyroid
cancer (ATC) and identify genetic alterations of potential diagnostic, prognostic, and …

Classifying BRAF alterations in cancer: new rational therapeutic strategies for actionable mutations

M Dankner, AAN Rose, S Rajkumar, PM Siegel… - Oncogene, 2018 - nature.com
Abstract The RAS–RAF–MEK–ERK signaling cascade is among the most frequently mutated
pathways in human cancer. Approximately 50% of melanoma patients possess a druggable …

[HTML][HTML] Genomic mapping of metastatic organotropism in lung adenocarcinoma

HB Lengel, B Mastrogiacomo, JG Connolly, KS Tan… - Cancer Cell, 2023 - cell.com
Summary We analyzed 2,532 lung adenocarcinomas (LUAD) to identify the
clinicopathological and genomic features associated with metastasis, metastatic burden …