[HTML][HTML] Integrating omics databases for enhanced crop breeding

H Chao, S Zhang, Y Hu, Q Ni, S Xin, L Zhao… - Journal of Integrative …, 2024 - degruyter.com
Crop plant breeding involves selecting and developing new plant varieties with desirable
traits such as increased yield, improved disease resistance, and enhanced nutritional value …

The era of panomics-driven gene discovery in plants

S Mishra, AK Srivastava, AW Khan, LSP Tran… - Trends in Plant …, 2024 - cell.com
Panomics is an approach to integrate multiple 'omics' datasets, generated using different
individuals or natural variations. Considering their diverse phenotypic spectrum, the …

SoyMD: a platform combining multi-omics data with various tools for soybean research and breeding

Z Yang, C Luo, X Pei, S Wang, Y Huang… - Nucleic Acids …, 2024 - academic.oup.com
Advanced multi-omics technologies offer much information that can uncover the regulatory
mechanisms from genotype to phenotype. In soybean, numerous multi-omics databases …

IPOP: an integrative plant multi-omics platform for cross-species comparison and evolutionary study

W Huang, X Hu, Y Ren, M Song, C Ma… - Molecular Biology and …, 2023 - academic.oup.com
The advent of high-throughput sequencing technologies has led to the production of a
significant amount of omics data in plants, which serves as valuable assets for conducting …

Online data resource for exploring transposon insertion polymorphisms in public soybean germplasm accessions

Z Yin, Q Yang, D Shen, J Liu, W Huang… - Plant …, 2023 - academic.oup.com
Abstract Soybean (Glycine max L. Merrill) is one of the most important economical crops. A
large number of whole-genome resequencing datasets have been generated and are …

LettuceDB: an integrated multi-omics database for cultivated lettuce

W Zhou, T Yang, L Zeng, J Chen, Y Wang, X Guo… - Database, 2024 - academic.oup.com
Crop genomics has advanced rapidly during the past decade, which generated a great
abundance of omics data from multi-omics studies. How to utilize the accumulating data …

[HTML][HTML] Isoflavonoid metabolism in leguminous plants: an update and perspectives

Q Yang, G Wang - Frontiers in Plant Science, 2024 - frontiersin.org
Isoflavonoids constitute a well-investigated category of phenylpropanoid-derived
specialized metabolites primarily found in leguminous plants. They play a crucial role in …

GmNF‐YC4 delays soybean flowering and maturation by directly repressing GmFT2a and GmFT5a expression

Y Cai, L Chen, X Liu, W Yao… - Journal of Integrative Plant …, 2024 - Wiley Online Library
Flowering time and growth period are key agronomic traits which directly affect soybean
(Glycine max (L.) Merr.) adaptation to diverse latitudes and farming systems. The …

[HTML][HTML] HEMU: An integrated comparative genomics database and analysis platform for Andropogoneae grasses

Y Zhu, Z Wang, Z Zhou, Y Liu, X Gao, W Guo, J Shi - Plant Communications, 2024 - cell.com
Dear Editor, Tribe Andropogoneae within the family Poaceae encompasses 92 genera and
1200 species of substantial agronomic and ecological importance, as represented by maize …

Genome-wide identification and functional prediction of BYPASS1-related (BPS1) homologs in soybean

X Pei, F Wang, H Du, M He, L Li, C Gou, Z Chen… - Molecular …, 2023 - Springer
The BYPASS1-related gene (BPS1) encodes a protein with an unknown functional domain
that regulates plant organ growth and development by inhibiting the continuous production …