Genome-wide characterization and expression analyses of superoxide dismutase (SOD) genes in Gossypium hirsutum

W Wang, X Zhang, F Deng, R Yuan, F Shen - BMC genomics, 2017 - Springer
Abstract Background Superoxide dismutases (SODs) are a key antioxidant enzyme family,
which have been implicated in protecting plants against the toxic effects of reactive oxygen …

Epigenetic regulation of auxin-induced somatic embryogenesis in plants

B Wójcikowska, AM Wójcik, MD Gaj - International Journal of Molecular …, 2020 - mdpi.com
Somatic embryogenesis (SE) that is induced in plant explants in response to auxin treatment
is closely associated with an extensive genetic reprogramming of the cell transcriptome. The …

Identification of Salt Tolerance-related microRNAs and Their Targets in Maize (Zea mays L.) Using High-throughput Sequencing and Degradome Analysis

R Fu, M Zhang, Y Zhao, X He, C Ding, S Wang… - Frontiers in plant …, 2017 - frontiersin.org
To identify the known and novel microRNAs (miRNAs) and their targets that are involved in
the response and adaptation of maize (Zea mays) to salt stress, miRNAs and their targets …

miR156-SPL modules regulate induction of somatic embryogenesis in citrus callus

JM Long, CY Liu, MQ Feng, Y Liu… - Journal of …, 2018 - academic.oup.com
Abstract miR156 is a highly conserved plant miRNA and has been extensively studied
because of its versatile roles in plant development. Here, we report a novel role of miR156 in …

Regulation mechanism of long non-coding RNA in plant response to stress

X Sun, H Zheng, N Sui - Biochemical and biophysical research …, 2018 - Elsevier
Long non-coding RNA (lncRNA) is a non-coding RNA greater than 200 nucleotides in
length. LncRNAs can regulate gene expression at transcription and post-transcription …

Integration of small RNAs, degradome and transcriptome sequencing in hyperaccumulator Sedum alfredii uncovers a complex regulatory network and provides …

X Han, H Yin, X Song, Y Zhang, M Liu… - Plant biotechnology …, 2016 - Wiley Online Library
The hyperaccumulating ecotype of Sedum alfredii Hance is a cadmium (Cd)/zinc/lead co‐
hyperaccumulating species of Crassulaceae. It is a promising phytoremediation candidate …

Metabolome and transcriptome association analysis reveals dynamic regulation of purine metabolism and flavonoid synthesis in transdifferentiation during somatic …

H Guo, H Guo, L Zhang, Z Tang, X Yu, J Wu… - International Journal of …, 2019 - mdpi.com
Plant regeneration via somatic embryogenesis (SE) is a key step during genetic
engineering. In the current study, integrated widely targeted metabolomics and RNA …

Differentially expressed small RNAs in Arabidopsis galls formed by Meloidogyne javanica: a functional role for miR390 and its TAS3‐derived tasiRNAs

J Cabrera, M Barcala, A García, A Rio‐Machín… - New …, 2016 - Wiley Online Library
Root‐knot nematodes (RKN s) induce inside the vascular cylinder the giant cells (GC s)
embedded in the galls. The distinctive gene repression in early‐developing GC s could be …

The catalase gene family in cotton: genome-wide characterization and bioinformatics analysis

W Wang, Y Cheng, D Chen, D Liu, M Hu, J Dong… - Cells, 2019 - mdpi.com
Catalases (CATs), which were coded by the catalase gene family, were a type notably
distinguished ROS-metabolizing proteins implicated to perform various physiological …

Epigenetic regulation and gene markers as signals of early somatic embryogenesis

F Mahdavi-Darvari, NM Noor, I Ismanizan - Plant Cell, Tissue and Organ …, 2015 - Springer
Identification and characterization of gene markers for somatic embryogenesis offer the
possibility of determining the embryogenic potential of somatic cells before any …