Intrinsically disordered proteins: critical components of the wetware
P Kulkarni, S Bhattacharya, S Achuthan… - Chemical …, 2022 - ACS Publications
Despite the wealth of knowledge gained about intrinsically disordered proteins (IDPs) since
their discovery, there are several aspects that remain unexplored and, hence, poorly …
their discovery, there are several aspects that remain unexplored and, hence, poorly …
Three-dimensional in vitro tumor models for cancer research and drug evaluation
Cancer occurs when cells acquire genomic instability and inflammation, produce abnormal
levels of epigenetic factors/proteins and tumor suppressors, reprogram the energy …
levels of epigenetic factors/proteins and tumor suppressors, reprogram the energy …
[HTML][HTML] PhysiCell: An open source physics-based cell simulator for 3-D multicellular systems
A Ghaffarizadeh, R Heiland, SH Friedman… - PLoS computational …, 2018 - journals.plos.org
Many multicellular systems problems can only be understood by studying how cells move,
grow, divide, interact, and die. Tissue-scale dynamics emerge from systems of many …
grow, divide, interact, and die. Tissue-scale dynamics emerge from systems of many …
[HTML][HTML] Engineering cancer microenvironments for in vitro 3-D tumor models
The natural microenvironment of tumors is composed of extracellular matrix (ECM), blood
vasculature, and supporting stromal cells. The physical characteristics of ECM as well as the …
vasculature, and supporting stromal cells. The physical characteristics of ECM as well as the …
[HTML][HTML] Simulating tissue mechanics with agent-based models: concepts, perspectives and some novel results
P Van Liedekerke, MM Palm, N Jagiella… - Computational particle …, 2015 - Springer
In this paper we present an overview of agent-based models that are used to simulate
mechanical and physiological phenomena in cells and tissues, and we discuss underlying …
mechanical and physiological phenomena in cells and tissues, and we discuss underlying …
The biology and mathematical modelling of glioma invasion: a review
JCL Alfonso, K Talkenberger… - Journal of the …, 2017 - royalsocietypublishing.org
Adult gliomas are aggressive brain tumours associated with low patient survival rates and
limited life expectancy. The most important hallmark of this type of tumour is its invasive …
limited life expectancy. The most important hallmark of this type of tumour is its invasive …
Computational oncology—mathematical modelling of drug regimens for precision medicine
D Barbolosi, J Ciccolini, B Lacarelle, F Barlési… - Nature reviews Clinical …, 2016 - nature.com
Computational oncology is a generic term that encompasses any form of computer-based
modelling relating to tumour biology and cancer therapy. Mathematical modelling can be …
modelling relating to tumour biology and cancer therapy. Mathematical modelling can be …
[HTML][HTML] Mathematical modeling in cancer nanomedicine: a review
Cancer continues to be among the leading healthcare problems worldwide, and efforts
continue not just to find better drugs, but also better drug delivery methods. The need for …
continue not just to find better drugs, but also better drug delivery methods. The need for …
Mathematical modeling of tumor-immune cell interactions
GE Mahlbacher, KC Reihmer, HB Frieboes - Journal of Theoretical Biology, 2019 - Elsevier
The anti-tumor activity of the immune system is increasingly recognized as critical for the
mounting of a prolonged and effective response to cancer growth and invasion, and for …
mounting of a prolonged and effective response to cancer growth and invasion, and for …
Simulating cancer growth with multiscale agent-based modeling
There have been many techniques developed in recent years to in silico model a variety of
cancer behaviors. Agent-based modeling is a specific discrete-based hybrid modeling …
cancer behaviors. Agent-based modeling is a specific discrete-based hybrid modeling …