Dataset design for building models of chemical reactivity

P Raghavan, BC Haas, ME Ruos, J Schleinitz… - ACS Central …, 2023 - ACS Publications
Models can codify our understanding of chemical reactivity and serve a useful purpose in
the development of new synthetic processes via, for example, evaluating hypothetical …

When yield prediction does not yield prediction: an overview of the current challenges

V Voinarovska, M Kabeshov, D Dudenko… - Journal of Chemical …, 2023 - ACS Publications
Machine Learning (ML) techniques face significant challenges when predicting advanced
chemical properties, such as yield, feasibility of chemical synthesis, and optimal reaction …

What can large language models do in chemistry? a comprehensive benchmark on eight tasks

T Guo, B Nan, Z Liang, Z Guo… - Advances in …, 2023 - proceedings.neurips.cc
Abstract Large Language Models (LLMs) with strong abilities in natural language
processing tasks have emerged and have been applied in various kinds of areas such as …

Unified deep learning model for multitask reaction predictions with explanation

J Lu, Y Zhang - Journal of chemical information and modeling, 2022 - ACS Publications
There is significant interest and importance to develop robust machine learning models to
assist organic chemistry synthesis. Typically, task-specific machine learning models for …

Enabling late-stage drug diversification by high-throughput experimentation with geometric deep learning

DF Nippa, K Atz, R Hohler, AT Müller, A Marx… - Nature Chemistry, 2024 - nature.com
Late-stage functionalization is an economical approach to optimize the properties of drug
candidates. However, the chemical complexity of drug molecules often makes late-stage …

Graph-based molecular representation learning

Z Guo, K Guo, B Nan, Y Tian, RG Iyer, Y Ma… - arXiv preprint arXiv …, 2022 - arxiv.org
Molecular representation learning (MRL) is a key step to build the connection between
machine learning and chemical science. In particular, it encodes molecules as numerical …

Interplay of Computation and Experiment in Enantioselective Catalysis: Rationalization, Prediction, and─ Correction?

MP Maloney, BA Stenfors, P Helquist, PO Norrby… - ACS …, 2023 - ACS Publications
The application of computational methods in enantioselective catalysis has evolved from the
rationalization of the observed stereochemical outcome to their prediction and application to …

Predicting reaction conditions from limited data through active transfer learning

E Shim, JA Kammeraad, Z Xu, A Tewari, T Cernak… - Chemical …, 2022 - pubs.rsc.org
Transfer and active learning have the potential to accelerate the development of new
chemical reactions, using prior data and new experiments to inform models that adapt to the …

Recent applications of machine learning in molecular property and chemical reaction outcome predictions

S Shilpa, G Kashyap, RB Sunoj - The Journal of Physical …, 2023 - ACS Publications
Burgeoning developments in machine learning (ML) and its rapidly growing adaptations in
chemistry are noteworthy. Motivated by the successful deployments of ML in the realm of …

The challenge of balancing model sensitivity and robustness in predicting yields: a benchmarking study of amide coupling reactions

Z Liu, YS Moroz, O Isayev - Chemical Science, 2023 - pubs.rsc.org
Accurate prediction of reaction yield is the holy grail for computer-assisted synthesis
prediction, but current models have failed to generalize to large literature datasets. To …