Immunotherapy efficacy on mismatch repair-deficient colorectal cancer: From bench to bedside

DY Lizardo, C Kuang, S Hao, J Yu, Y Huang… - Biochimica et Biophysica …, 2020 - Elsevier
Colorectal cancers (CRCs) with deficient mismatch repair (dMMR) or microsatellite instability-
high (MSI-H) often have sustained responses to immune checkpoint inhibitors (ICIs) …

[HTML][HTML] Advances and opportunities in malaria population genomics

DE Neafsey, AR Taylor, BL MacInnis - Nature Reviews Genetics, 2021 - nature.com
Almost 20 years have passed since the first reference genome assemblies were published
for Plasmodium falciparum, the deadliest malaria parasite, and Anopheles gambiae, the …

Evolution of the ancestral mammalian karyotype and syntenic regions

J Damas, M Corbo, J Kim… - Proceedings of the …, 2022 - National Acad Sciences
Decrypting the rearrangements that drive mammalian chromosome evolution is critical to
understanding the molecular bases of speciation, adaptation, and disease susceptibility …

C9orf72 nucleotide repeat structures initiate molecular cascades of disease

AR Haeusler, CJ Donnelly, G Periz, EAJ Simko… - Nature, 2014 - nature.com
A hexanucleotide repeat expansion (HRE),(GGGGCC) n, in C9orf72 is the most common
genetic cause of the neurodegenerative diseases amyotrophic lateral sclerosis (ALS) and …

[HTML][HTML] Circular RNA biogenesis can proceed through an exon-containing lariat precursor

SP Barrett, PL Wang, J Salzman - elife, 2015 - elifesciences.org
Pervasive expression of circular RNA is a recently discovered feature of eukaryotic gene
expression programs, yet its function remains largely unknown. The presumed biogenesis of …

Clonal hematopoiesis driven by chromosome 1q/MDM4 trisomy defines a canonical route toward leukemia in Fanconi anemia

M Sebert, S Gachet, T Leblanc, A Rousseau, O Bluteau… - Cell Stem Cell, 2023 - cell.com
Fanconi anemia (FA) patients experience chromosome instability, yielding hematopoietic
stem/progenitor cell (HSPC) exhaustion and predisposition to poor-prognosis myeloid …

Organoid models of gastrointestinal cancers in basic and translational research

HCH Lau, O Kranenburg, H Xiao, J Yu - … reviews Gastroenterology & …, 2020 - nature.com
Cancer is a major public health problem worldwide. Gastrointestinal cancers account for
approximately one-third of the total global cancer incidence and mortality. Historically, the …

TAREAN: a computational tool for identification and characterization of satellite DNA from unassembled short reads

P Novák, L Ávila Robledillo, A Koblížková… - Nucleic acids …, 2017 - academic.oup.com
Satellite DNA is one of the major classes of repetitive DNA, characterized by tandemly
arranged repeat copies that form contiguous arrays up to megabases in length. This type of …

[HTML][HTML] Repetitive DNA sequence detection and its role in the human genome

X Liao, W Zhu, J Zhou, H Li, X Xu, B Zhang… - Communications …, 2023 - nature.com
Repetitive DNA sequences playing critical roles in driving evolution, inducing variation, and
regulating gene expression. In this review, we summarized the definition, arrangement, and …

Next-generation sequencing—an overview of the history, tools, and “Omic” applications

JK Kulski - Next generation sequencing-advances, applications …, 2016 - books.google.com
Next-generation sequencing (NGS) technologies using DNA, RNA, or methylation
sequencing have impacted enormously on the life sciences. NGS is the choice for large …