Evolutionary consequences, constraints and potential of polyploidy in plants
H Weiss-Schneeweiss, K Emadzade, TS Jang… - … and genome research, 2013 - karger.com
Polyploidy, the possession of more than 2 complete genomes, is a major force in plant
evolution known to affect the genetic and genomic constitution and the phenotype of an …
evolution known to affect the genetic and genomic constitution and the phenotype of an …
Species delimitation and relationships: the dance of the seven veils
An increasing number of studies using genetic data at the generic and species levels reveal
complex patterns of relationships among populations and species. Incomplete lineage …
complex patterns of relationships among populations and species. Incomplete lineage …
A universal probe set for targeted sequencing of 353 nuclear genes from any flowering plant designed using k-medoids clustering
Sequencing of target-enriched libraries is an efficient and cost-effective method for obtaining
DNA sequence data from hundreds of nuclear loci for phylogeny reconstruction. Much of the …
DNA sequence data from hundreds of nuclear loci for phylogeny reconstruction. Much of the …
Evolution of Rosaceae fruit types based on nuclear phylogeny in the context of geological times and genome duplication
Fruits are the defining feature of angiosperms, likely have contributed to angiosperm
successes by protecting and dispersing seeds, and provide foods to humans and other …
successes by protecting and dispersing seeds, and provide foods to humans and other …
Hyb‐Seq: Combining target enrichment and genome skimming for plant phylogenomics
• Premise of the study: Hyb‐Seq, the combination of target enrichment and genome
skimming, allows simultaneous data collection for low‐copy nuclear genes and high‐copy …
skimming, allows simultaneous data collection for low‐copy nuclear genes and high‐copy …
Resolution of deep angiosperm phylogeny using conserved nuclear genes and estimates of early divergence times
Angiosperms are the most successful plants and support human livelihood and ecosystems.
Angiosperm phylogeny is the foundation of studies of gene function and phenotypic …
Angiosperm phylogeny is the foundation of studies of gene function and phenotypic …
Resolution of Brassicaceae phylogeny using nuclear genes uncovers nested radiations and supports convergent morphological evolution
CH Huang, R Sun, YI Hu, L Zeng… - Molecular biology …, 2016 - academic.oup.com
Brassicaceae is one of the most diverse and economically valuable angiosperm families
with widely cultivated vegetable crops and scientifically important model plants, such as …
with widely cultivated vegetable crops and scientifically important model plants, such as …
DNA barcoding of Cymbidium by genome skimming: Call for next‐generation nuclear barcodes
L Zhang, YW Huang, JL Huang, JD Ya… - Molecular Ecology …, 2023 - Wiley Online Library
Cymbidium is an orchid genus that has undergone rapid radiation and has high ornamental,
economic, ecological and cultural importance, but its classification based on morphology is …
economic, ecological and cultural importance, but its classification based on morphology is …
Using nuclear gene data for plant phylogenetics: Progress and prospects II. Next‐gen approaches
Single and low copy nuclear genes offer a larger number of, and more rapidly evolving,
characters than the chloroplast and nuclear ribosomal gene sequences that have dominated …
characters than the chloroplast and nuclear ribosomal gene sequences that have dominated …
Molecular dating, evolutionary rates, and the age of the grasses
Many questions in evolutionary biology require an estimate of divergence times but, for
groups with a sparse fossil record, such estimates rely heavily on molecular dating methods …
groups with a sparse fossil record, such estimates rely heavily on molecular dating methods …