Commonality despite exceptional diversity in the baseline human antibody repertoire

B Briney, A Inderbitzin, C Joyce, DR Burton - Nature, 2019 - nature.com
In principle, humans can produce an antibody response to any non-self-antigen molecule in
the appropriate context. This flexibility is achieved by the presence of a large repertoire of …

[HTML][HTML] Ranking the biases: The choice of OTUs vs. ASVs in 16S rRNA amplicon data analysis has stronger effects on diversity measures than rarefaction and OTU …

M Chiarello, M McCauley, S Villéger, CR Jackson - PloS one, 2022 - journals.plos.org
Advances in the analysis of amplicon sequence datasets have introduced a methodological
shift in how research teams investigate microbial biodiversity, away from sequence identity …

[PDF][PDF] Species richness: estimation and comparison

A Chao, CH Chiu - Wiley StatsRef: statistics reference online, 2016 - researchgate.net
On the basis of the sampling data from an assemblage, estimation of species richness
(observed plus undetected) is statistically difficult especially for highly-diverse assemblages …

[HTML][HTML] Towards a multisensor station for automated biodiversity monitoring

JW Wägele, P Bodesheim, SJ Bourlat, J Denzler… - Basic and Applied …, 2022 - Elsevier
Rapid changes of the biosphere observed in recent years are caused by both small and
large scale drivers, like shifts in temperature, transformations in land-use, or changes in the …

[HTML][HTML] A census-based estimate of Earth's bacterial and archaeal diversity

S Louca, F Mazel, M Doebeli, LW Parfrey - PLoS biology, 2019 - journals.plos.org
The global diversity of Bacteria and Archaea, the most ancient and most widespread forms
of life on Earth, is a subject of intense controversy. This controversy stems largely from the …

Three decades of increasing fish biodiversity across the northeast Atlantic and the Arctic Ocean

C Gordó-Vilaseca, F Stephenson… - Proceedings of the …, 2023 - National Acad Sciences
Observed range shifts of numerous species support predictions of climate change models
that species will shift their distribution northward into the Arctic and sub-Arctic seas due to …

[HTML][HTML] How many metazoan species live in the world's largest mineral exploration region?

M Rabone, JH Wiethase, E Simon-Lledó, AM Emery… - Current biology, 2023 - cell.com
The global surge in demand for metals such as cobalt and nickel has created
unprecedented interest in deep-sea habitats with mineral resources. The largest area of …

[HTML][HTML] Crop rotation, but not cover crops, influenced soil bacterial community composition in a corn-soybean system in southern Wisconsin

LA Chamberlain, ML Bolton, MS Cox, G Suen… - Applied Soil …, 2020 - Elsevier
Crop rotation, the successive cultivation of different crops on the same field, has been
practiced for centuries, and it is often associated with increased crop yields. Cover cropping …

How should we estimate diversity in the fossil record? Testing richness estimators using sampling‐standardised discovery curves

RA Close, SW Evers, J Alroy… - Methods in Ecology and …, 2018 - Wiley Online Library
To infer genuine patterns of biodiversity change in the fossil record, we must be able to
accurately estimate relative differences in numbers of taxa (richness) despite considerable …

[HTML][HTML] Microbial communities, resistance genes, and resistome risks in urban lakes of different trophic states: internal links and external influences

C Mao, X Wang, X Li, Q Kong, EG Xu… - Journal of Hazardous …, 2023 - Elsevier
Anthropogenic discharge of nutrients, metals, and antibiotics poses multiple threats to the
health of aquatic ecosystems and humans, eg, causing eutrophication, and introduction of …