The population genetics of pathogenic Escherichia coli
E Denamur, O Clermont, S Bonacorsi… - Nature Reviews …, 2021 - nature.com
Escherichia coli is a commensal of the vertebrate gut that is increasingly involved in various
intestinal and extra-intestinal infections as an opportunistic pathogen. Numerous pathotypes …
intestinal and extra-intestinal infections as an opportunistic pathogen. Numerous pathotypes …
Genomics and pathotypes of the many faces of Escherichia coli
J Geurtsen, M de Been, E Weerdenburg… - FEMS microbiology …, 2022 - academic.oup.com
Escherichia coli is the most researched microbial organism in the world. Its varied impact on
human health, consisting of commensalism, gastrointestinal disease, or extraintestinal …
human health, consisting of commensalism, gastrointestinal disease, or extraintestinal …
[HTML][HTML] Metabolite interactions between host and microbiota during health and disease: Which feeds the other?
Y Zhang, R Chen, DD Zhang, S Qi, Y Liu - Biomedicine & Pharmacotherapy, 2023 - Elsevier
Metabolites produced by the host and microbiota play a crucial role in how human bodies
develop and remain healthy. Most of these metabolites are produced by microbiota and …
develop and remain healthy. Most of these metabolites are produced by microbiota and …
Cells within cells: Rickettsiales and the obligate intracellular bacterial lifestyle
J Salje - Nature Reviews Microbiology, 2021 - nature.com
The Rickettsiales are a group of obligate intracellular vector-borne Gram-negative bacteria
that include many organisms of clinical and agricultural importance, including Anaplasma …
that include many organisms of clinical and agricultural importance, including Anaplasma …
[HTML][HTML] The bacterial pangenome as a new tool for analysing pathogenic bacteria
L Rouli, V Merhej, PE Fournier, D Raoult - New microbes and new …, 2015 - Elsevier
The bacterial pangenome was introduced in 2005 and, in recent years, has been the subject
of many studies. Thanks to progress in next-generation sequencing methods, the …
of many studies. Thanks to progress in next-generation sequencing methods, the …
Genome-scale metabolic reconstructions of multiple Escherichia coli strains highlight strain-specific adaptations to nutritional environments
Genome-scale models (GEMs) of metabolism were constructed for 55 fully sequenced
Escherichia coli and Shigella strains. The GEMs enable a systems approach to …
Escherichia coli and Shigella strains. The GEMs enable a systems approach to …
Horizontally transferred genetic elements and their role in pathogenesis of bacterial disease
C Gyles, P Boerlin - Veterinary pathology, 2014 - journals.sagepub.com
This article reviews the roles that laterally transferred genes (LTG) play in the virulence of
bacterial pathogens. The features of LTG that allow them to be recognized in bacterial …
bacterial pathogens. The features of LTG that allow them to be recognized in bacterial …
Bacterial adaptation through loss of function
AK Hottes, PL Freddolino, A Khare, ZN Donnell… - PLoS …, 2013 - journals.plos.org
The metabolic capabilities and regulatory networks of bacteria have been optimized by
evolution in response to selective pressures present in each species' native ecological …
evolution in response to selective pressures present in each species' native ecological …
Emergence and evolution of virulence in human pathogenic fungi
One billion people worldwide are affected by fungal pathogens, of which 1.6 million
succumb to fungal infections per year. This review discusses the emergence and evolution …
succumb to fungal infections per year. This review discusses the emergence and evolution …
Genomic comparisons of Lactobacillus crispatus and Lactobacillus iners reveal potential ecological drivers of community composition in the vagina
MT France, H Mendes-Soares… - Applied and …, 2016 - Am Soc Microbiol
Lactobacillus crispatus and Lactobacillus iners are common inhabitants of the healthy
human vagina. These two species are closely related and are thought to perform similar …
human vagina. These two species are closely related and are thought to perform similar …