Metagenomic analyses: past and future trends

C Simon, R Daniel - Applied and environmental microbiology, 2011 - Am Soc Microbiol
Metagenomics has revolutionized microbiology by paving the way for a cultivation-
independent assessment and exploitation of microbial communities present in complex …

Halophiles, coming stars for industrial biotechnology

J Yin, JC Chen, Q Wu, GQ Chen - Biotechnology advances, 2015 - Elsevier
Industrial biotechnology aims to produce chemicals, materials and biofuels to ease the
challenges of shortage on petroleum. However, due to the disadvantages of bioprocesses …

1,003 reference genomes of bacterial and archaeal isolates expand coverage of the tree of life

S Mukherjee, R Seshadri, NJ Varghese… - Nature …, 2017 - nature.com
We present 1,003 reference genomes that were sequenced as part of the Genomic
Encyclopedia of Bacteria and Archaea (GEBA) initiative, selected to maximize sequence …

Evolution, substrate specificity and subfamily classification of glycoside hydrolase family 5 (GH5)

H Aspeborg, PM Coutinho, Y Wang, H Brumer… - BMC evolutionary …, 2012 - Springer
Abstract Background The large Glycoside Hydrolase family 5 (GH5) groups together a wide
range of enzymes acting on β-linked oligo-and polysaccharides, and glycoconjugates from a …

High throughput sequencing methods and analysis for microbiome research

JM Di Bella, Y Bao, GB Gloor, JP Burton… - Journal of microbiological …, 2013 - Elsevier
High-throughput sequencing technology is rapidly improving in quality, speed and cost. It is
therefore becoming more widely used to study whole communities of prokaryotes in many …

Revisiting cellulase production and redefining current strategies based on major challenges

RC Kuhad, D Deswal, S Sharma… - … and Sustainable Energy …, 2016 - Elsevier
Lignocellulosic biomass has been considered as an important and sustainable source of
renewable energy. Cellulose constitutes the major component of the lignocellulosic biomass …

Metagenomic insights into evolution of a heavy metal-contaminated groundwater microbial community

CL Hemme, Y Deng, TJ Gentry, MW Fields… - The ISME …, 2010 - academic.oup.com
Understanding adaptation of biological communities to environmental change is a central
issue in ecology and evolution. Metagenomic analysis of a stressed groundwater microbial …

Thermostable enzymes as biocatalysts in the biofuel industry

CJ Yeoman, Y Han, D Dodd, CM Schroeder… - Advances in applied …, 2010 - Elsevier
Lignocellulose is the most abundant carbohydrate source in nature and represents an ideal
renewable energy source. Thermostable enzymes that hydrolyze lignocellulose to its …

Stability of biocatalysts

KM Polizzi, AS Bommarius, JM Broering… - Current opinion in …, 2007 - Elsevier
Despite their many favorable qualities, the marginal stability of biocatalysts in many types of
reaction media often has prevented or delayed their implementation for industrial-scale …

Metagenomics, biotechnology with non-culturable microbes

C Schmeisser, H Steele, WR Streit - Applied microbiology and …, 2007 - Springer
Metagenomics as a new field of research has been developed over the past decade to
elucidate the genomes of the non-cultured microbes with the goal to better understand …