[HTML][HTML] Deep convolutional neural networks for pan-specific peptide-MHC class I binding prediction
Y Han, D Kim - BMC bioinformatics, 2017 - Springer
Background Computational scanning of peptide candidates that bind to a specific major
histocompatibility complex (MHC) can speed up the peptide-based vaccine development …
histocompatibility complex (MHC) can speed up the peptide-based vaccine development …
Immunoinformatics: predicting peptide–MHC binding
Immunoinformatics is a discipline that applies methods of computer science to study and
model the immune system. A fundamental question addressed by immunoinformatics is how …
model the immune system. A fundamental question addressed by immunoinformatics is how …
Emerging vaccine informatics
Vaccine informatics is an emerging research area that focuses on development and
applications of bioinformatics methods that can be used to facilitate every aspect of the …
applications of bioinformatics methods that can be used to facilitate every aspect of the …
KIR2DS2 recognizes conserved peptides derived from viral helicases in the context of HLA-C
MM Naiyer, SA Cassidy, A Magri, V Cowton… - Science …, 2017 - science.org
Killer cell immunoglobulin-like receptors (KIRs) are rapidly evolving species-specific natural
killer (NK) cell receptors associated with protection against multiple different human viral …
killer (NK) cell receptors associated with protection against multiple different human viral …
Toward more accurate pan-specific MHC-peptide binding prediction: a review of current methods and tools
L Zhang, K Udaka, H Mamitsuka… - Briefings in …, 2012 - academic.oup.com
Binding of short antigenic peptides to major histocompatibility complex (MHC) molecules is
a core step in adaptive immune response. Precise identification of MHC-restricted peptides …
a core step in adaptive immune response. Precise identification of MHC-restricted peptides …
Prediction of MHC-peptide binding: a systematic and comprehensive overview
EM Lafuente, PA Reche - Current pharmaceutical design, 2009 - ingentaconnect.com
T cell immune responses are driven by the recognition of peptide antigens (T cell epitopes)
that are bound to major histocompatibility complex (MHC) molecules. T cell epitope …
that are bound to major histocompatibility complex (MHC) molecules. T cell epitope …
[HTML][HTML] NetMHCIIpan-2.0 - Improved pan-specific HLA-DR predictions using a novel concurrent alignment and weight optimization training procedure
Background Binding of peptides to Major Histocompatibility class II (MHC-II) molecules play
a central role in governing responses of the adaptive immune system. MHC-II molecules …
a central role in governing responses of the adaptive immune system. MHC-II molecules …
Structure-based methods for binding mode and binding affinity prediction for peptide-MHC complexes
Understanding the mechanisms involved in the activation of an immune response is
essential to many fields in human health, including vaccine development and personalized …
essential to many fields in human health, including vaccine development and personalized …
Modeling the adaptive immune system: predictions and simulations
Motivation: Immunological bioinformatics methods are applicable to a broad range of
scientific areas. The specifics of how and where they might be implemented have recently …
scientific areas. The specifics of how and where they might be implemented have recently …