Pseudomonas aeruginosa adaptation and evolution in patients with cystic fibrosis

E Rossi, R La Rosa, JA Bartell, RL Marvig… - Nature Reviews …, 2021 - nature.com
Intense genome sequencing of Pseudomonas aeruginosa isolates from cystic fibrosis (CF)
airways has shown inefficient eradication of the infecting bacteria, as well as previously …

Epidemiology, biology, and impact of clonal Pseudomonas aeruginosa infections in cystic fibrosis

MD Parkins, R Somayaji, VJ Waters - Clinical microbiology …, 2018 - Am Soc Microbiol
Chronic lower airway infection with Pseudomonas aeruginosa is a major contributor to
morbidity and mortality in individuals suffering from the genetic disease cystic fibrosis (CF) …

Within-host evolution of bacterial pathogens

X Didelot, AS Walker, TE Peto, DW Crook… - Nature Reviews …, 2016 - nature.com
Whole-genome sequencing has opened the way for investigating the dynamics and
genomic evolution of bacterial pathogens during the colonization and infection of humans …

The resistome of Pseudomonas aeruginosa in relationship to phenotypic susceptibility

VN Kos, M Déraspe, RE McLaughlin… - Antimicrobial agents …, 2015 - Am Soc Microbiol
Many clinical isolates of Pseudomonas aeruginosa cause infections that are difficult to
eradicate due to their resistance to a wide variety of antibiotics. Key genetic determinants of …

Evolution of Pseudomonas aeruginosa antimicrobial resistance and fitness under low and high mutation rates

G Cabot, L Zamorano, B Moyà, C Juan… - Antimicrobial agents …, 2016 - Am Soc Microbiol
Pseudomonas aeruginosa, a major cause of nosocomial and chronic infections, is
considered a paradigm of antimicrobial resistance development. However, the evolutionary …

Genome Analysis of a Transmissible Lineage of Pseudomonas aeruginosa Reveals Pathoadaptive Mutations and Distinct Evolutionary Paths of Hypermutators

RL Marvig, HK Johansen, S Molin, L Jelsbak - PloS genetics, 2013 - journals.plos.org
Genome sequencing of bacterial pathogens has advanced our understanding of their
evolution, epidemiology, and response to antibiotic therapy. However, we still have only a …

High-resolution in situ transcriptomics of Pseudomonas aeruginosa unveils genotype independent patho-phenotypes in cystic fibrosis lungs

E Rossi, M Falcone, S Molin, HK Johansen - Nature communications, 2018 - nature.com
Life-long bacterial infections in cystic fibrosis (CF) airways constitute an excellent model
both for persistent infections and for microbial adaptive evolution in complex dynamic …

Within-host evolution of Pseudomonas aeruginosa reveals adaptation toward iron acquisition from hemoglobin

RL Marvig, S Damkiær, SMH Khademi, TM Markussen… - MBio, 2014 - Am Soc Microbiol
Pseudomonas aeruginosa airway infections are a major cause of mortality and morbidity of
cystic fibrosis (CF) patients. In order to persist, P. aeruginosa depends on acquiring iron from …

Recombination is a key driver of genomic and phenotypic diversity in a Pseudomonas aeruginosa population during cystic fibrosis infection

SE Darch, A McNally, F Harrison, J Corander… - Scientific reports, 2015 - nature.com
Abstract The Cystic Fibrosis (CF) lung harbors a complex, polymicrobial ecosystem, in which
Pseudomonas aeruginosa is capable of sustaining chronic infections, which are highly …

Selective sweeps and parallel pathoadaptation drive Pseudomonas aeruginosa evolution in the cystic fibrosis lung

J Diaz Caballero, ST Clark, B Coburn, Y Zhang… - MBio, 2015 - Am Soc Microbiol
Pulmonary infections caused by Pseudomonas aeruginosa are a recalcitrant problem in
cystic fibrosis (CF) patients. While the clinical implications and long-term evolutionary …