Resurrecting surviving Neandertal lineages from modern human genomes
Anatomically modern humans overlapped and mated with Neandertals such that non-
African humans inherit~ 1 to 3% of their genomes from Neandertal ancestors. We identified …
African humans inherit~ 1 to 3% of their genomes from Neandertal ancestors. We identified …
[HTML][HTML] A mega-analysis of genome-wide association studies for major depressive disorder
Major Depressive Disorder Working Group of … - Molecular …, 2013 - ncbi.nlm.nih.gov
Prior genome-wide association studies (GWAS) of major depressive disorder (MDD) have
met with limited success. We sought to increase statistical power to detect disease loci by …
met with limited success. We sought to increase statistical power to detect disease loci by …
Identifying causal variants at loci with multiple signals of association
Although genome-wide association studies have successfully identified thousands of risk
loci for complex traits, only a handful of the biologically causal variants, responsible for …
loci for complex traits, only a handful of the biologically causal variants, responsible for …
GSVA: gene set variation analysis for microarray and RNA-seq data
Background Gene set enrichment (GSE) analysis is a popular framework for condensing
information from gene expression profiles into a pathway or signature summary. The …
information from gene expression profiles into a pathway or signature summary. The …
A genetic atlas of human admixture history
Modern genetic data combined with appropriate statistical methods have the potential to
contribute substantially to our understanding of human history. We have developed an …
contribute substantially to our understanding of human history. We have developed an …
Genome-wide association of polycystic ovary syndrome implicates alterations in gonadotropin secretion in European ancestry populations
MG Hayes, M Urbanek, DA Ehrmann… - Nature …, 2015 - nature.com
Polycystic ovary syndrome (PCOS) is a common, highly heritable complex disorder of
unknown aetiology characterized by hyperandrogenism, chronic anovulation and defects in …
unknown aetiology characterized by hyperandrogenism, chronic anovulation and defects in …
Improving the accuracy and efficiency of identity-by-descent detection in population data
BL Browning, SR Browning - Genetics, 2013 - academic.oup.com
Segments of indentity-by-descent (IBD) detected from high-density genetic data are useful
for many applications, including long-range phase determination, phasing family data …
for many applications, including long-range phase determination, phasing family data …
Genome-wide association studies of 14 agronomic traits in rice landraces
X Huang, X Wei, T Sang, Q Zhao, QI Feng, Y Zhao… - Nature …, 2010 - nature.com
Uncovering the genetic basis of agronomic traits in crop landraces that have adapted to
various agro-climatic conditions is important to world food security. Here we have …
various agro-climatic conditions is important to world food security. Here we have …
GC content shapes mRNA storage and decay in human cells
mRNA translation and decay appear often intimately linked although the rules of this
interplay are poorly understood. In this study, we combined our recent P-body transcriptome …
interplay are poorly understood. In this study, we combined our recent P-body transcriptome …
Estimating and interpreting FST: the impact of rare variants
In a pair of seminal papers, Sewall Wright and Gustave Malécot introduced F ST as a
measure of structure in natural populations. In the decades that followed, a number of …
measure of structure in natural populations. In the decades that followed, a number of …