[HTML][HTML] Environmental DNA metabarcoding for benthic monitoring: A review of sediment sampling and DNA extraction methods
J Pawlowski, K Bruce, K Panksep, FI Aguirre… - Science of the Total …, 2022 - Elsevier
Environmental DNA (eDNA) metabarcoding (parallel sequencing of DNA/RNA for
identification of whole communities within a targeted group) is revolutionizing the field of …
identification of whole communities within a targeted group) is revolutionizing the field of …
Microbial diversity and ecological interactions of microorganisms in the mangrove ecosystem: Threats, vulnerability, and adaptations
Mangroves are among the world's most productive ecosystems and a part of the “blue
carbon” sink. They act as a connection between the terrestrial and marine ecosystems …
carbon” sink. They act as a connection between the terrestrial and marine ecosystems …
Hydrocarbon degradation and response of seafloor sediment bacterial community in the northern Gulf of Mexico to light Louisiana sweet crude oil
Abstract The Deepwater Horizon (DWH) blowout resulted in the deposition to the seafloor of
up to 4.9% of 200 million gallons of oil released into the Gulf of Mexico. The petroleum …
up to 4.9% of 200 million gallons of oil released into the Gulf of Mexico. The petroleum …
[HTML][HTML] Metagenomic analysis exhibited the co-metabolism of polycyclic aromatic hydrocarbons by bacterial community from estuarine sediment
S Zhang, Z Hu, H Wang - Environment International, 2019 - Elsevier
The bacterial community from estuarine sediment undertakes the bioremediation and
energy transformation of anthropogenic pollutants especially polycyclic aromatic …
energy transformation of anthropogenic pollutants especially polycyclic aromatic …
Chronic environmental perturbation influences microbial community assembly patterns
Acute environmental perturbations are reported to induce deterministic microbial community
assembly, while it is hypothesized that chronic perturbations promote development of …
assembly, while it is hypothesized that chronic perturbations promote development of …
Earth microbiome project and global systems biology
Jack A. Gilbert, a, b Founding Editor in Chief, mSystems, Janet K. Jansson, c Senior Editor,
mSystems, Rob Knight, d, e, f Senior Editor, mSystems aBiosciences Division, Argonne …
mSystems, Rob Knight, d, e, f Senior Editor, mSystems aBiosciences Division, Argonne …
Rice genotypes and root-associated niches shifted bacterial community in response to pollution of di-(2-ethylhexyl) phthalate (DEHP) for promoting DEHP removal
CL Zhu, HX Lü, YH Huang, J Cheng, H Li, YW Li… - Journal of Hazardous …, 2023 - Elsevier
Organic pollutants influenced root-associated bacterial community. However, the response
variation of root-associated bacterial community among different rice genotypes exposed to …
variation of root-associated bacterial community among different rice genotypes exposed to …
Ecological response of nitrification to oil spills and its impact on the nitrogen cycle
H Urakawa, S Rajan, ME Feeney… - Environmental …, 2019 - Wiley Online Library
Marine oil spills are catastrophic events that cause massive damage to ecosystems at all
trophic levels. While most of the research has focused on carbon‐degrading …
trophic levels. While most of the research has focused on carbon‐degrading …
Microbial and metabolic succession on common building materials under high humidity conditions
Despite considerable efforts to characterize the microbial ecology of the built environment,
the metabolic mechanisms underpinning microbial colonization and successional dynamics …
the metabolic mechanisms underpinning microbial colonization and successional dynamics …
Variations of different PAH fractions and bacterial communities during the biological self-purification in the soil vertical profile
L Tang, Z Bao, X Zhao, X Wang, Y Gao, C Lu… - Journal of Hazardous …, 2023 - Elsevier
Wild PAH-contaminated sites struggle to provide continuous and stable monitoring, resulting
in the potential risks of contaminated soil utilization could not be evaluated effectively. This …
in the potential risks of contaminated soil utilization could not be evaluated effectively. This …