TRMT1-catalyzed tRNA modifications are required for redox homeostasis to ensure proper cellular proliferation and oxidative stress survival

JM Dewe, BL Fuller, JM Lentini… - Molecular and cellular …, 2017 - Taylor & Francis
Mutations in the tRNA methyltransferase 1 (TRMT1) gene have been identified as the cause
of certain forms of autosomal-recessive intellectual disability (ID). However, the molecular …

Therapeutic promise of engineered nonsense suppressor tRNAs

JJ Porter, CS Heil, JD Lueck - Wiley Interdisciplinary Reviews …, 2021 - Wiley Online Library
Nonsense mutations change an amino acid codon to a premature termination codon (PTC)
generally through a single‐nucleotide substitution. The generation of a PTC results in a …

Repurposing tRNAs for nonsense suppression

S Albers, B Beckert, MC Matthies, CS Mandava… - Nature …, 2021 - nature.com
Three stop codons (UAA, UAG and UGA) terminate protein synthesis and are almost
exclusively recognized by release factors. Here, we design de novo transfer RNAs (tRNAs) …

Small non‐coding RNA and colorectal cancer

H Chen, Z Xu, D Liu - Journal of cellular and molecular …, 2019 - Wiley Online Library
Colorectal cancer (CRC) is the third most common malignance. Although great efforts have
been made to understand the pathogenesis of CRC, the underlying mechanisms are still …

The dark side of the epitranscriptome: chemical modifications in long non-coding RNAs

R Jacob, S Zander, T Gutschner - International Journal of Molecular …, 2017 - mdpi.com
The broad application of next-generation sequencing technologies in conjunction with
improved bioinformatics has helped to illuminate the complexity of the transcriptome, both in …

Small-seq for single-cell small-RNA sequencing

M Hagemann-Jensen, I Abdullayev, R Sandberg… - Nature protocols, 2018 - nature.com
Small RNAs participate in several cellular processes, including splicing, RNA modification,
mRNA degradation, and translational arrest. Traditional methods for sequencing small …

Trade-offs between tRNA abundance and mRNA secondary structure support smoothing of translation elongation rate

TE Gorochowski, Z Ignatova… - Nucleic acids …, 2015 - academic.oup.com
Translation of protein from mRNA is a complex multi-step process that occurs at a non-
uniform rate. Variability in ribosome speed along an mRNA enables refinement of the …

The dysregulation of tRNAs and tRNA derivatives in cancer

S Huang, B Sun, Z Xiong, Y Shu, H Zhou… - Journal of Experimental …, 2018 - Springer
Transfer RNAs (tRNAs), traditionally considered to participate in protein translation, were
interspersed in the entire genome. Recent studies suggested that dysregulation was …

Extracellular tRNAs and tRNA-derived fragments

JP Tosar, A Cayota - RNA biology, 2020 - Taylor & Francis
Fragmentation of tRNAs generates a family of small RNAs collectively known as tRNA-
derived fragments. These fragments vary in sequence and size but have been shown to …

[HTML][HTML] Degradation of host translational machinery drives tRNA acquisition in viruses

JY Yang, W Fang, F Miranda-Sanchez, JM Brown… - Cell Systems, 2021 - cell.com
Viruses are traditionally thought to be under selective pressure to maintain compact
genomes and thus depend on host cell translational machinery for reproduction. However …