Gliner: Generalist model for named entity recognition using bidirectional transformer
Named Entity Recognition (NER) is essential in various Natural Language Processing (NLP)
applications. Traditional NER models are effective but limited to a set of predefined entity …
applications. Traditional NER models are effective but limited to a set of predefined entity …
[PDF][PDF] Overview of the CHEMDNER patents task
M Krallinger, O Rabal… - … of the fifth …, 2015 - biocreative.bioinformatics.udel.edu
A considerable effort has been made to extract biological and chemical entities, as well as
their relationships, from the scientific literature, either manually through traditional literature …
their relationships, from the scientific literature, either manually through traditional literature …
[PDF][PDF] Text Mining for Bioinformatics Using Biomedical Literature.
A Lamurias, FM Couto - 2019 - core.ac.uk
Biomedical literature has become a rich source of information for various applications.
Automatic text mining methods can make the processing of extracting information from a …
Automatic text mining methods can make the processing of extracting information from a …
Data augmentation via context similarity: An application to biomedical Named Entity Recognition
In this paper, we present COntext SImilarity-based data augmentation for NER (COSINER),
a new method for improving Named Entity Recognition (NER) tasks using data …
a new method for improving Named Entity Recognition (NER) tasks using data …
[HTML][HTML] Title2Vec: A contextual job title embedding for occupational named entity recognition and other applications
Occupational data mining and analysis is an important task in understanding today's
industry and job market. Various machine learning techniques are proposed and gradually …
industry and job market. Various machine learning techniques are proposed and gradually …
Rethinking Negative Instances for Generative Named Entity Recognition
Y Ding, J Li, P Wang, Z Tang, B Yan… - arXiv preprint arXiv …, 2024 - arxiv.org
Large Language Models (LLMs) have demonstrated impressive capabilities for generalizing
in unseen tasks. In the Named Entity Recognition (NER) task, recent advancements have …
in unseen tasks. In the Named Entity Recognition (NER) task, recent advancements have …
[HTML][HTML] Semantic annotation of consumer health questions
Background Consumers increasingly use online resources for their health information
needs. While current search engines can address these needs to some extent, they …
needs. While current search engines can address these needs to some extent, they …
[HTML][HTML] Incorporating domain knowledge in chemical and biomedical named entity recognition with word representations
T Munkhdalai, M Li, K Batsuren, HA Park… - Journal of …, 2015 - Springer
Abstract Background Chemical and biomedical Named Entity Recognition (NER) is an
essential prerequisite task before effective text mining can begin for biochemical-text data …
essential prerequisite task before effective text mining can begin for biochemical-text data …
Relation Extraction in underexplored biomedical domains: A diversity-optimised sampling and synthetic data generation approach
The sparsity of labelled data is an obstacle to the development of Relation Extraction (RE)
models and the completion of databases in various biomedical areas. While being of high …
models and the completion of databases in various biomedical areas. While being of high …
[HTML][HTML] NLM-Gene, a richly annotated gold standard dataset for gene entities that addresses ambiguity and multi-species gene recognition
The automatic recognition of gene names and their corresponding database identifiers in
biomedical text is an important first step for many downstream text-mining applications …
biomedical text is an important first step for many downstream text-mining applications …