Perspectives and benefits of high-throughput long-read sequencing in microbial ecology
Short-read, high-throughput sequencing (HTS) methods have yielded numerous important
insights into microbial ecology and function. Yet, in many instances short-read HTS …
insights into microbial ecology and function. Yet, in many instances short-read HTS …
Latest techniques to study DNA methylation
Q Gouil, A Keniry - Essays in biochemistry, 2019 - portlandpress.com
Bisulfite sequencing is a powerful technique to detect 5-methylcytosine in DNA that has
immensely contributed to our understanding of epigenetic regulation in plants and animals …
immensely contributed to our understanding of epigenetic regulation in plants and animals …
Long-read sequencing in the era of epigenomics and epitranscriptomics
As long-read sequencing technologies continue to advance, the possibility of obtaining
maps of DNA and RNA modifications at single-molecule resolution has become a reality …
maps of DNA and RNA modifications at single-molecule resolution has become a reality …
The design and application of DNA-editing enzymes as base editors
KL Rallapalli, AC Komor - Annual review of biochemistry, 2023 - annualreviews.org
DNA-editing enzymes perform chemical reactions on DNA nucleobases. These reactions
can change the genetic identity of the modified base or modulate gene expression. Interest …
can change the genetic identity of the modified base or modulate gene expression. Interest …
FOXOs: masters of the equilibrium
T Gui, BMT Burgering - The FEBS Journal, 2022 - Wiley Online Library
Forkhead box O (FOXO) transcription factors (TFs) are a subclass of the larger family of
forkhead TFs. Mammalians express four members FOXO1, FOXO3, FOXO4, and FOXO6 …
forkhead TFs. Mammalians express four members FOXO1, FOXO3, FOXO4, and FOXO6 …
Exploring the crop epigenome: a comparison of DNA methylation profiling techniques
Epigenetic modifications play a vital role in the preservation of genome integrity and in the
regulation of gene expression. DNA methylation, one of the key mechanisms of epigenetic …
regulation of gene expression. DNA methylation, one of the key mechanisms of epigenetic …
Molecular Coping Mechanisms: Reprogramming tRNAs To Regulate Codon-Biased Translation of Stress Response Proteins
MM Mitchener, TJ Begley… - Accounts of Chemical …, 2023 - ACS Publications
Conspectus As part of the classic central dogma of molecular biology, transfer RNAs
(tRNAs) are integral to protein translation as the adaptor molecules that link the genetic code …
(tRNAs) are integral to protein translation as the adaptor molecules that link the genetic code …
MODOMICS: an operational guide to the use of the RNA modification pathways database
P Boccaletto, B Bagiński - RNA bioinformatics, 2021 - Springer
MODOMICS is an established database of RNA modifications that provides comprehensive
information concerning chemical structures of modified ribonucleosides, their biosynthetic …
information concerning chemical structures of modified ribonucleosides, their biosynthetic …
Deep4mC: systematic assessment and computational prediction for DNA N4-methylcytosine sites by deep learning
Abstract DNA N4-methylcytosine (4mC) modification represents a novel epigenetic
regulation. It involves in various cellular processes, including DNA replication, cell cycle and …
regulation. It involves in various cellular processes, including DNA replication, cell cycle and …