[PDF][PDF] One-component systems that regulate the expression of degradation pathways for aromatic compounds

G Durante-Rodríguez, H Gómez-Álvarez… - … and Lipid Interactions, 2018 - researchgate.net
The expression of pathways for the catabolism of aromatic compounds is energetically
expensive, and aromatic compounds are generally toxic even to bacteria that can use them …

Precise regulation of differential transcriptions of various catabolic genes by OdcR via a single nucleotide mutation in the promoter ensures the safety of metabolic flux

K Chen, Z Ke, S Wang, S Wang, K Yang… - Applied and …, 2022 - Am Soc Microbiol
Synergistic regulation of the expression of various genes in a catabolic pathway is crucial for
the degradation, survival, and adaptation of microorganisms in polluted environments …

Microbial bioremediation of chemical pollutants: how bacteria cope with multi‐stress environmental scenarios

V de Lorenzo, H Loza‐Tavera - Bacterial stress responses, 2010 - Wiley Online Library
This chapter discusses the aspects of bioremediation that are related to metabolism of
recalcitrant chemicals by bacteria, leaving out also detoxification and immobilization of metal …

[HTML][HTML] Genomic reconstruction of σ54 regulons in Clostridiales

X Nie, W Dong, C Yang - BMC genomics, 2019 - Springer
Background The σ 54 factor controls unique promoters and interacts with a specialized
activator (enhancer binding proteins [EBP]) for transcription initiation. Although σ 54 is …

Characterizing the regulation of the Pu promoter in Acinetobacter baylyi ADP1

WE Huang, AC Singer, AJ Spiers… - Environmental …, 2008 - Wiley Online Library
Effective gene trapping and screening requires sensory and regulatory compatibility of both
host and exogenous systems. The naturally competent bacterium Acinetobacter baylyi ADP1 …

Degradation of nitroaromatic compounds: a model to study evolution of metabolic pathways

M Kivisaar - Molecular microbiology, 2009 - Wiley Online Library
Although many nitroaromatic compounds have been in nature for only a few decades,
bacteria have already evolved the ability to metabolize them. Both horizontal transfer of …

Transcriptional regulation of organohalide pollutant utilisation in bacteria

B Maucourt, S Vuilleumier… - FEMS Microbiology …, 2020 - academic.oup.com
Organohalides are organic molecules formed biotically and abiotically, both naturally and
through industrial production. They are usually toxic and represent a health risk for living …

[HTML][HTML] Novel Regulator MphX Represses Activation of Phenol Hydroxylase Genes Caused by a XylR/DmpR-Type Regulator MphR in Acinetobacter calcoaceticus

H Yu, Z Peng, Y Zhan, J Wang, Y Yan, M Chen, W Lu… - PLoS …, 2011 - journals.plos.org
Acinetobacter calcoaceticus PHEA-2 utilizes phenol as its sole carbon and energy source
and has a multi-component phenol hydroxylase-encoding gene operon (mphKLMNOP) for …

[HTML][HTML] Deep Sequencing Whole Transcriptome Exploration of the σE Regulon in Neisseria meningitidis

RAG Huis in't Veld, AM Willemsen, AHC van Kampen… - PLoS …, 2011 - journals.plos.org
Bacteria live in an ever-changing environment and must alter protein expression promptly to
adapt to these changes and survive. Specific response genes that are regulated by a subset …

[HTML][HTML] De novo evolution of complex, global and hierarchical gene regulatory mechanisms

DJ Jenkins, DJ Stekel - Journal of molecular evolution, 2010 - Springer
Gene regulatory networks exhibit complex, hierarchical features such as global regulation
and network motifs. There is much debate about whether the evolutionary origins of such …