The physics of higher-order interactions in complex systems

F Battiston, E Amico, A Barrat, G Bianconi… - Nature Physics, 2021 - nature.com
Complex networks have become the main paradigm for modelling the dynamics of
interacting systems. However, networks are intrinsically limited to describing pairwise …

[HTML][HTML] Networks beyond pairwise interactions: Structure and dynamics

F Battiston, G Cencetti, I Iacopini, V Latora, M Lucas… - Physics reports, 2020 - Elsevier
The complexity of many biological, social and technological systems stems from the richness
of the interactions among their units. Over the past decades, a variety of complex systems …

[HTML][HTML] Hypergraph geometry reflects higher-order dynamics in protein interaction networks

KA Murgas, E Saucan, R Sandhu - Scientific Reports, 2022 - nature.com
Protein interactions form a complex dynamic molecular system that shapes cell phenotype
and function; in this regard, network analysis is a powerful tool for studying the dynamics of …

Random walks on hypergraphs with edge-dependent vertex weights

U Chitra, B Raphael - International conference on machine …, 2019 - proceedings.mlr.press
Hypergraphs are used in machine learning to model higher-order relationships in data.
While spectral methods for graphs are well-established, spectral theory for hypergraphs …

A threshold model of cascading failure on random hypergraphs

RR Liu, CX Jia, M Li, F Meng - Chaos, Solitons & Fractals, 2023 - Elsevier
Higher-order interactions are ubiquitous in the real world and play a critical role in
maintaining the overall function of complex systems. To investigate the effects of higher …

First-order transition to oscillation death in coupled oscillators with higher-order interactions

R Ghosh, UK Verma, S Jalan, MD Shrimali - Physical Review E, 2023 - APS
We investigate the dynamical evolution of Stuart-Landau oscillators globally coupled
through conjugate or dissimilar variables on simplicial complexes. We report a first-order …

Towards a survey on static and dynamic hypergraph visualizations

MT Fischer, A Frings, DA Keim… - 2021 IEEE visualization …, 2021 - ieeexplore.ieee.org
Leveraging hypergraph structures to model advanced processes has gained much attention
over the last few years in many areas, ranging from protein-interaction in computational …

Facilitating prediction of adverse drug reactions by using knowledge graphs and multi-label learning models

E Muñoz, V Nováček… - Briefings in …, 2019 - academic.oup.com
Timely identification of adverse drug reactions (ADRs) is highly important in the domains of
public health and pharmacology. Early discovery of potential ADRs can limit their effect on …

Current and future directions in network biology

M Zitnik, MM Li, A Wells, K Glass, DM Gysi… - arXiv preprint arXiv …, 2023 - arxiv.org
Network biology, an interdisciplinary field at the intersection of computational and biological
sciences, is critical for deepening understanding of cellular functioning and disease. While …

Ecological networks over the edge: hypergraph trait-mediated indirect interaction (TMII) structure

AJ Golubski, EE Westlund, J Vandermeer… - Trends in ecology & …, 2016 - cell.com
Analyses of ecological network structure have yielded important insights into the functioning
of complex ecological systems. However, such analyses almost universally omit non …