Genomic selection: A tool for accelerating the efficiency of molecular breeding for development of climate-resilient crops

N Budhlakoti, AK Kushwaha, A Rai… - Frontiers in …, 2022 - frontiersin.org
Since the inception of the theory and conceptual framework of genomic selection (GS),
extensive research has been done on evaluating its efficiency for utilization in crop …

[HTML][HTML] Machine learning approaches for crop improvement: Leveraging phenotypic and genotypic big data

H Tong, Z Nikoloski - Journal of plant physiology, 2021 - Elsevier
Highly efficient and accurate selection of elite genotypes can lead to dramatic shortening of
the breeding cycle in major crops relevant for sustaining present demands for food, feed …

Partitioning heritability of regulatory and cell-type-specific variants across 11 common diseases

A Gusev, SH Lee, G Trynka, H Finucane… - The American Journal of …, 2014 - cell.com
Regulatory and coding variants are known to be enriched with associations identified by
genome-wide association studies (GWASs) of complex disease, but their contributions to …

Application of high-dimensional feature selection: evaluation for genomic prediction in man

ML Bermingham, R Pong-Wong, A Spiliopoulou… - Scientific reports, 2015 - nature.com
In this study, we investigated the effect of five feature selection approaches on the
performance of a mixed model (G-BLUP) and a Bayesian (Bayes C) prediction method. We …

[图书][B] Genetic data analysis for plant and animal breeding

F Isik, J Holland, C Maltecca - 2017 - Springer
We wrote this book to fill the gap between textbooks of quantitative genetic theory and
software manuals that provide details on analytical methods but little context or perspective …

Genomic prediction of host resistance to sea lice in farmed Atlantic salmon populations

HY Tsai, A Hamilton, AE Tinch, DR Guy… - Genetics Selection …, 2016 - Springer
Background Sea lice have significant negative economic and welfare impacts on marine
Atlantic salmon farming. Since host resistance to sea lice has a substantial genetic …

Perspectives for genomic selection applications and research in plants

N Heslot, JL Jannink, ME Sorrells - Crop Science, 2015 - Wiley Online Library
Genomic selection (GS) has created a lot of excitement and expectations in the animal‐and
plant‐breeding research communities. In this review, we briefly describe how genomic …

Integrating crop growth models with whole genome prediction through approximate Bayesian computation

F Technow, CD Messina, LR Totir, M Cooper - PloS one, 2015 - journals.plos.org
Genomic selection, enabled by whole genome prediction (WGP) methods, is revolutionizing
plant breeding. Existing WGP methods have been shown to deliver accurate predictions in …

High-throughput phenotyping enabled genetic dissection of crop lodging in wheat

D Singh, X Wang, U Kumar, L Gao, M Noor… - Frontiers in plant …, 2019 - frontiersin.org
Novel high-throughput phenotyping (HTP) approaches are needed to advance the
understanding of genotype-to-phenotype and accelerate plant breeding. The first generation …

PANOMICS meets germplasm

W Weckwerth, A Ghatak, A Bellaire… - Plant Biotechnology …, 2020 - Wiley Online Library
Genotyping‐by‐sequencing has enabled approaches for genomic selection to improve
yield, stress resistance and nutritional value. More and more resource studies are emerging …