NCBI Taxonomy: a comprehensive update on curation, resources and tools
Abstract The National Center for Biotechnology Information (NCBI) Taxonomy includes
organism names and classifications for every sequence in the nucleotide and protein …
organism names and classifications for every sequence in the nucleotide and protein …
Best practices in metabarcoding of fungi: from experimental design to results
The development of high‐throughput sequencing (HTS) technologies has greatly improved
our capacity to identify fungi and unveil their ecological roles across a variety of ecosystems …
our capacity to identify fungi and unveil their ecological roles across a variety of ecosystems …
The UNITE database for molecular identification and taxonomic communication of fungi and other eukaryotes: sequences, taxa and classifications reconsidered
Abstract UNITE (https://unite. ut. ee) is a web-based database and sequence management
environment for molecular identification of eukaryotes. It targets the nuclear ribosomal …
environment for molecular identification of eukaryotes. It targets the nuclear ribosomal …
RESCRIPt: Reproducible sequence taxonomy reference database management
Nucleotide sequence and taxonomy reference databases are critical resources for
widespread applications including marker-gene and metagenome sequencing for …
widespread applications including marker-gene and metagenome sequencing for …
[HTML][HTML] Fusarium: more than a node or a foot-shaped basal cell
Recent publications have argued that there are potentially serious consequences for
researchers in recognising distinct genera in the terminal fusarioid clade of the family …
researchers in recognising distinct genera in the terminal fusarioid clade of the family …
The numbers of fungi: Contributions from traditional taxonomic studies and challenges of metabarcoding
The global diversity of fungi has been estimated using several different approaches. There is
somewhere between 2–11 million estimated species, but the number of formally described …
somewhere between 2–11 million estimated species, but the number of formally described …
Diagnosis of invasive fungal infections: challenges and recent developments
W Fang, J Wu, M Cheng, X Zhu, M Du, C Chen… - Journal of biomedical …, 2023 - Springer
Background The global burden of invasive fungal infections (IFIs) has shown an upsurge in
recent years due to the higher load of immunocompromised patients suffering from various …
recent years due to the higher load of immunocompromised patients suffering from various …
The UNITE database for molecular identification of fungi: handling dark taxa and parallel taxonomic classifications
RH Nilsson, KH Larsson, AFS Taylor… - Nucleic acids …, 2019 - academic.oup.com
Abstract UNITE (https://unite. ut. ee/) is a web-based database and sequence management
environment for the molecular identification of fungi. It targets the formal fungal barcode—the …
environment for the molecular identification of fungi. It targets the formal fungal barcode—the …
Microplastics accumulate fungal pathogens in terrestrial ecosystems
G Gkoutselis, S Rohrbach, J Harjes, M Obst… - Scientific Reports, 2021 - nature.com
Microplastic (MP) is a pervasive pollutant in nature that is colonised by diverse groups of
microbes, including potentially pathogenic species. Fungi have been largely neglected in …
microbes, including potentially pathogenic species. Fungi have been largely neglected in …
DNA barcoding, an effective tool for species identification: a review
S Antil, JS Abraham, S Sripoorna, S Maurya… - Molecular biology …, 2023 - Springer
DNA barcoding is a powerful taxonomic tool to identify and discover species. DNA
barcoding utilizes one or more standardized short DNA regions for taxon identification. With …
barcoding utilizes one or more standardized short DNA regions for taxon identification. With …