Genome dynamics during experimental evolution
JE Barrick, RE Lenski - Nature Reviews Genetics, 2013 - nature.com
Evolutionary changes in organismal traits may occur either gradually or suddenly. However,
until recently, there has been little direct information about how phenotypic changes are …
until recently, there has been little direct information about how phenotypic changes are …
Mutation as a stress response and the regulation of evolvability
RS Galhardo, PJ Hastings… - Critical reviews in …, 2007 - Taylor & Francis
Our concept of a stable genome is evolving to one in which genomes are plastic and
responsive to environmental changes. Growing evidence shows that a variety of …
responsive to environmental changes. Growing evidence shows that a variety of …
Sex and virulence in Escherichia coli: an evolutionary perspective
Pathogenic Escherichia coli cause over 160 million cases of dysentery and one million
deaths per year, whereas non‐pathogenic E. coli constitute part of the normal intestinal flora …
deaths per year, whereas non‐pathogenic E. coli constitute part of the normal intestinal flora …
Organised Genome Dynamics in the Escherichia coli Species Results in Highly Diverse Adaptive Paths
The Escherichia coli species represents one of the best-studied model organisms, but also
encompasses a variety of commensal and pathogenic strains that diversify by high rates of …
encompasses a variety of commensal and pathogenic strains that diversify by high rates of …
Report of the ad hoc committee for the re-evaluation of the species definition in bacteriology.
E Stackebrandt, W Frederiksen… - … of systematic and …, 2002 - microbiologyresearch.org
An ad hoc committee for the re-evaluation of the species definition in bacteriology met in
Gent, Belgium, in February 2002. The committee made various recommendations regarding …
Gent, Belgium, in February 2002. The committee made various recommendations regarding …
Prokaryotic evolution in light of gene transfer
JP Gogarten, WF Doolittle… - Molecular biology and …, 2002 - academic.oup.com
Accumulating prokaryotic gene and genome sequences reveal that the exchange of genetic
information through both homology-dependent recombination and horizontal (lateral) gene …
information through both homology-dependent recombination and horizontal (lateral) gene …
Bootstrap, Bayesian probability and maximum likelihood mapping: exploring new tools for comparative genome analyses
O Zhaxybayeva, JP Gogarten - BMC genomics, 2002 - Springer
Background Horizontal gene transfer (HGT) played an important role in shaping microbial
genomes. In addition to genes under sporadic selection, HGT also affects housekeeping …
genomes. In addition to genes under sporadic selection, HGT also affects housekeeping …
Impact of recombination on bacterial evolution
X Didelot, MCJ Maiden - Trends in microbiology, 2010 - cell.com
Genetic exchange plays a defining role in the evolution of many bacteria. The recent
accumulation of nucleotide sequence data from multiple members of diverse bacterial …
accumulation of nucleotide sequence data from multiple members of diverse bacterial …
Antibiotic resistance in plant growth promoting bacteria: A comprehensive review and future perspectives to mitigate potential gene invasion risks
Plant growth-promoting bacteria (PGPB) are endowed with several attributes that can be
beneficial for host plants. They opened myriad doors toward green technology approach to …
beneficial for host plants. They opened myriad doors toward green technology approach to …
Stress-induced mutagenesis in bacteria
The evolutionary significance of stress-induced mutagenesis was evaluated by studying
mutagenesis in aging colonies (MAC) of Escherichia coli natural isolates. A large fraction of …
mutagenesis in aging colonies (MAC) of Escherichia coli natural isolates. A large fraction of …