Normics: proteomic normalization by variance and data-inherent correlation structure

FF Dressler, J Brägelmann, M Reischl… - Molecular & Cellular …, 2022 - ASBMB
Several algorithms for the normalization of proteomic data are currently available, each
based on a priori assumptions. Among these is the extent to which differential expression …

Identification and testing of reference genes for qRT-PCR analysis during pear fruit development

G Wang, Z Guo, X Wang, SL Guan, H Gao, K Qi, C Gu… - Biologia, 2022 - Springer
Quantitative real-time PCR (qRT-PCR) is currently one of the most reliable and improved
tools for analyzing gene expression. Various studies have shown that housekeeping genes …

Reference gene selection for RT-qPCR normalization of strawberry at various organs, different growing stages of fruits, and salt-stress treatment

H Topcu - Turkish Journal of Agriculture and Forestry, 2022 - journals.tubitak.gov.tr
Abstract Strawberry (Fragaria x ananassa Duch.) is a favorite fruit of high economic value
due to its good taste and high nutrition ingredients. Strawberry is a fruit grown around the …

Transcriptome Mining Provides Insights into Cell Wall Metabolism and Fiber Lignification in Agave tequilana Weber

LF Maceda-López, EB Góngora-Castillo… - Plants, 2022 - mdpi.com
Resilience of growing in arid and semiarid regions and a high capacity of accumulating
sugar-rich biomass with low lignin percentages have placed Agave species as an emerging …

[HTML][HTML] Identifying the stability of housekeeping genes to be used for the quantitative real-time PCR normalization in retinal tissue of streptozotocin-induced diabetic …

MZ Sadikan, NAA Nasir, MJ Ibahim… - International Journal …, 2024 - ncbi.nlm.nih.gov
AIM To investigate the stability of the seven housekeeping genes: beta-actin (ActB),
glyceraldehyde-3-phosphate dehydrogenase (GAPDH), 18s ribosomal unit 5 (18s) …

Proximate composition and spatio-temporal heterogeneity of phytochemicals in Agave sisalana Perrine (sisal) adapted in different agro-ecological zones of Punjab …

S Shahzad, M Hussain, H Munir, M Arfan - Environmental Science and …, 2022 - Springer
Exploring extractable phytochemicals from locally adapted sisal plant vegetation vary
seasonally at different locations. This study elaborated proximate composition and …

Selection and stability validation of reference gene candidates for transcriptional analysis in Rousettus aegyptiacus

V Friedrichs, A Balkema-Buschmann, A Dorhoi… - Scientific Reports, 2021 - nature.com
Bats are the only mammals capable of powered flight and their body temperature can reach
up to 42° C during flight. Additionally, bats display robust type I IFN interferon (IFN-I) …

Transient Expression Analysis of Agave sisalana Heat Shock Protein Gene (AsHSP70) in Model Species (Nicotiana benthamiana) under Heat Stress

AA Batcho, B Jabbar, MB Sarwar, B Rashid, S Hassan… - Biology Bulletin, 2022 - Springer
This study is aimed at investigating whether overexpression of the heat shock protein gene
(AsHSP70) isolated from Agave sisalana will improve the heat stress tolerance in plants …

Reliable reference genes for qPCR normalization in females of the mirid predator, Cyrtorhinus lividipennis (Hemiptera: Miridae)

K Hu, K Chen, B Fu, J Liu, Y Li, Q Pan, F Liu - Biologia, 2022 - Springer
The green mirid bug Cyrtorhinus lividipennis (Hemiptera: Miridae), known as a predator,
plays an important role in modulating the population density of planthoppers and …

Combining transcriptome analysis and GWAS for identification and validation of marker genes in the Physalis peruviana-Fusarium oxysporum pathosystem

GA Garzón-Martínez, FL García-Arias… - PeerJ, 2021 - peerj.com
Vascular wilt, caused by the pathogen Fusarium oxysporum f. sp. physali (Foph), is a major
disease of cape gooseberry (Physalis peruviana L.) in Andean countries. Despite the …