Plant terminators: the unsung heroes of gene expression
FF De Felippes, PM Waterhouse - Journal of Experimental …, 2023 - academic.oup.com
To be properly expressed, genes need to be accompanied by a terminator, a region
downstream of the coding sequence that contains the information necessary for the …
downstream of the coding sequence that contains the information necessary for the …
[HTML][HTML] Tyrosine-1 of RNA polymerase II CTD controls global termination of gene transcription in mammals
N Shah, MA Maqbool, Y Yahia, AZ El Aabidine… - Molecular cell, 2018 - cell.com
The carboxy-terminal domain (CTD) of RNA polymerase (Pol) II is composed of a repetition
of YSPTSPS heptads and functions as a loading platform for protein complexes that regulate …
of YSPTSPS heptads and functions as a loading platform for protein complexes that regulate …
[HTML][HTML] Distinct Cdk9-phosphatase switches act at the beginning and end of elongation by RNA polymerase II
Reversible phosphorylation of Pol II and accessory factors helps order the transcription
cycle. Here, we define two kinase-phosphatase switches that operate at different points in …
cycle. Here, we define two kinase-phosphatase switches that operate at different points in …
[HTML][HTML] SCAF4 and SCAF8, mRNA anti-terminator proteins
LH Gregersen, R Mitter, AP Ugalde, T Nojima… - Cell, 2019 - cell.com
Accurate regulation of mRNA termination is required for correct gene expression. Here, we
describe a role for SCAF4 and SCAF8 as anti-terminators, suppressing the use of early …
describe a role for SCAF4 and SCAF8 as anti-terminators, suppressing the use of early …
Knockout of protein phosphatase 1 in Leishmania major reveals its role during RNA polymerase II transcription termination
R Kieft, Y Zhang, H Yan, RJ Schmitz… - Nucleic Acids …, 2023 - academic.oup.com
The genomes of kinetoplastids are organized into polycistronic transcription units that are
flanked by a modified DNA base (base J, beta-D-glucosyl-hydroxymethyluracil). Previous …
flanked by a modified DNA base (base J, beta-D-glucosyl-hydroxymethyluracil). Previous …
BRD4: a general regulator of transcription elongation
E Altendorfer, Y Mochalova, A Mayer - Transcription, 2022 - Taylor & Francis
Transcription elongation by RNA polymerase II (Pol II) has emerged as a regulatory hub in
gene expression. A key control point occurs during early transcription elongation when Pol II …
gene expression. A key control point occurs during early transcription elongation when Pol II …
Divergence of a conserved elongation factor and transcription regulation in budding and fission yeast
Complex regulation of gene expression in mammals has evolved from simpler eukaryotic
systems, yet the mechanistic features of this evolution remain elusive. Here, we compared …
systems, yet the mechanistic features of this evolution remain elusive. Here, we compared …
[HTML][HTML] ZC3H4 restricts non-coding transcription in human cells
The human genome encodes thousands of non-coding RNAs. Many of these terminate early
and are then rapidly degraded, but how their transcription is restricted is poorly understood …
and are then rapidly degraded, but how their transcription is restricted is poorly understood …
U1 snRNP telescripting: suppression of premature transcription termination in introns as a new layer of gene regulation
Recent observations showed that nascent RNA polymerase II transcripts, pre-mRNAs, and
noncoding RNAs are highly susceptible to premature 3′-end cleavage and …
noncoding RNAs are highly susceptible to premature 3′-end cleavage and …
Auxin-inducible degron system: an efficient protein degradation tool to study protein function
K Phanindhar, RK Mishra - Biotechniques, 2023 - Taylor & Francis
Targeted protein degradation, with its rapid protein depletion kinetics, allows the
measurement of acute changes in the cell. The auxin-inducible degron (AID) system, rapidly …
measurement of acute changes in the cell. The auxin-inducible degron (AID) system, rapidly …