High prevalence of clonally related ST182 NDM-1-producing Enterobacter cloacae complex clinical isolates in Greece

K Gartzonika, L Politi, A Mavroidi, AG Tsantes… - International Journal of …, 2023 - Elsevier
ABSTRACT NDM-type metallo-β-lactamase (MBL)-producing Enterobacterales remain
uncommon in the European region, especially among species other than Klebsiella …

Genomic features associated with the degree of phenotypic resistance to carbapenems in carbapenem-resistant Klebsiella pneumoniae

ZP Bulman, F Krapp, NB Pincus, E Wenzler… - Msystems, 2021 - Am Soc Microbiol
Carbapenem-resistant Klebsiella pneumoniae strains cause severe infections that are
difficult to treat. The production of carbapenemases such as the K. pneumoniae …

Antibiotic Resistance Characteristics of Pseudomonas aeruginosa Isolated from Keratitis in Australia and India

M Khan, F Stapleton, S Summers, SA Rice… - Antibiotics, 2020 - mdpi.com
This study investigated genomic differences in Australian and Indian Pseudomonas
aeruginosa isolates from keratitis (infection of the cornea). Overall, the Indian isolates were …

Comparative analysis of the core proteomes among the Pseudomonas major evolutionary groups reveals species-specific adaptations for Pseudomonas aeruginosa …

M Nikolaidis, D Mossialos, SG Oliver, GD Amoutzias - Diversity, 2020 - mdpi.com
The Pseudomonas genus includes many species living in diverse environments and hosts. It
is important to understand which are the major evolutionary groups and what are the …

Pangenome-wide and molecular evolution analyses of the Pseudomonas aeruginosa species

J Mosquera-Rendón, AM Rada-Bravo… - BMC genomics, 2016 - Springer
Background Drug treatments and vaccine designs against the opportunistic human
pathogen Pseudomonas aeruginosa have multiple issues, all associated with the diverse …

Typing and species identification of clinical Klebsiella isolates by Fourier transform infrared spectroscopy and matrix-assisted laser desorption ionization–time of flight …

AG Dinkelacker, S Vogt, P Oberhettinger… - Journal of clinical …, 2018 - Am Soc Microbiol
Klebsiella pneumoniae and related species are frequent causes of nosocomial infections
and outbreaks. Therefore, quick and reliable strain typing is crucial for the detection of …

Clustering of Pan- and Core-genome of Lactobacillus provides Novel Evolutionary Insights for Differentiation

RC Inglin, L Meile, MJA Stevens - BMC genomics, 2018 - Springer
Background Bacterial taxonomy aims to classify bacteria based on true evolutionary events
and relies on a polyphasic approach that includes phenotypic, genotypic and …

Bacteriocins of non-aureus staphylococci isolated from bovine milk

DA Carson, HW Barkema, S Naushad… - Applied and …, 2017 - Am Soc Microbiol
ABSTRACT Non-aureus staphylococci (NAS), the bacteria most commonly isolated from the
bovine udder, potentially protect the udder against infection by major mastitis pathogens due …

Host‐specific competitiveness to form nodules in Rhizobium leguminosarum symbiovar viciae

S Boivin, N Ait Lahmidi, D Sherlock… - New …, 2020 - Wiley Online Library
Fabeae legumes such as pea and faba bean form symbiotic nodules with a large diversity of
soil Rhizobium leguminosarum symbiovar viciae (Rlv) bacteria. However, bacteria …

[PDF][PDF] A review of pangenome tools and recent studies

GS Vernikos - The pangenome: diversity, dynamics and evolution …, 2020 - library.oapen.org
With the advance of sequencing technologies, the landscape of genomic analysis has been
transformed, by moving from single strain to species (or even higher taxa)-wide genomic …