Machine learning bridges omics sciences and plant breeding

J Yan, X Wang - Trends in Plant Science, 2023 - cell.com
Some of the biological knowledge obtained from fundamental research will be implemented
in applied plant breeding. To bridge basic research and breeding practice, machine learning …

Recent advances in artificial intelligence, mechanistic models, and speed breeding offer exciting opportunities for precise and accelerated genomics‐assisted …

JA Bhat, X Feng, ZA Mir, A Raina… - Physiologia …, 2023 - Wiley Online Library
Given the challenges of population growth and climate change, there is an urgent need to
expedite the development of high‐yielding stress‐tolerant crop cultivars. While traditional …

Dissecting the effect of heat stress on durum wheat under field conditions

EL Groli, E Frascaroli, M Maccaferri, K Ammar… - Frontiers in Plant …, 2024 - frontiersin.org
Introduction Heat stress negatively affects wheat production in several ways, mainly by
reducing growth rate, photosynthetic capacity and reducing spike fertility. Modeling stress …

Integrating and optimizing genomic, weather, and secondary trait data for multiclass classification

V Manthena, D Jarquín, R Howard - Frontiers in Genetics, 2023 - frontiersin.org
Modern plant breeding programs collect several data types such as weather, images, and
secondary or associated traits besides the main trait (eg, grain yield). Genomic data is high …

Improving Genomic Prediction using High-dimensional Secondary Phenotypes: the Genetic Latent Factor Approach

KAC Melsen, JF Kunst, J Crossa, MR Krause… - arXiv preprint arXiv …, 2024 - arxiv.org
Decreasing costs and new technologies have led to an increase in the amount of data
available to plant breeding programs. High-throughput phenotyping (HTP) platforms …

Selection of Genipa americana L. seed trees by genetic divergence in fruit, seeds, and seedlings

RE Cola, M da Penha Moreira Gonçalves… - Genetic Resources and …, 2024 - Springer
The understanding of the source's genetic characteristics and their use in restoration
projects is essential to maintaining restoration survival, mainly in tropical forests …

Integration of Genomics and Phenomics for Yield Prediction in Temperate and Tropical Maize

SA Tolley - 2023 - hammer.purdue.edu
Improved phenotyping technologies and data analytic strategies have the potential to
reduce the phenotyping bottleneck in breeding programs, increase the number of genotypes …

Statistical Methods for Multi-Omic Integration and Optimization to Improve Trait Forecasting

V Manthena - 2022 - search.proquest.com
The development of genomic selection (GS) methods has allowed plant breeding programs
to select favorable lines using genomic data before performing field trials. Improvements in …

[PDF][PDF] Accelerating Plant Breeding through Multivariate Genomic Prediction using gfBLUP

KAC Melsen - edepot.wur.nl
Datasets in several fields of research have become larger than ever, with plant breeding
being no exception. The development of high-throughput phenotyping (HTP) technology has …