Drug resistant Tuberculosis: A review

JL Khawbung, D Nath, S Chakraborty - … immunology, microbiology and …, 2021 - Elsevier
Tuberculosis (TB) was announced as a global emergency in 1993. There was an alarming
counter attack of TB worldwide. However, when it was known that TB can be cured …

Whole genome sequencing of Mycobacterium tuberculosis: current standards and open issues

CJ Meehan, GA Goig, TA Kohl, L Verboven… - NATURE reviews …, 2019 - nature.com
Whole genome sequencing (WGS) of Mycobacterium tuberculosis has rapidly progressed
from a research tool to a clinical application for the diagnosis and management of …

Pathogen genomics in public health

GL Armstrong, DR MacCannell, J Taylor… - … England Journal of …, 2019 - Mass Medical Soc
Rapid advances in DNA sequencing technology (“next-generation sequencing”) have
inspired optimism about the potential of human genomics for “precision medicine.” …

The changing paradigm of drug-resistant tuberculosis treatment: successes, pitfalls, and future perspectives

N Dookie, SL Ngema, R Perumal… - Clinical Microbiology …, 2022 - Am Soc Microbiol
Drug-resistant tuberculosis (DR-TB) remains a global crisis due to the increasing incidence
of drug-resistant forms of the disease, gaps in detection and prevention, models of care, and …

Application of next generation sequencing for diagnosis and clinical management of drug-resistant tuberculosis: updates on recent developments in the field

N Dookie, A Khan, N Padayatchi, K Naidoo - Frontiers in Microbiology, 2022 - frontiersin.org
The World Health Organization's End TB Strategy prioritizes universal access to an early
diagnosis and comprehensive drug susceptibility testing (DST) for all individuals with …

The Lancet Respiratory Medicine Commission: 2019 update: epidemiology, pathogenesis, transmission, diagnosis, and management of multidrug-resistant and …

K Dheda, T Gumbo, G Maartens, KE Dooley… - The Lancet …, 2019 - thelancet.com
Summary The Lancet Respiratory Medicine Commission on drug-resistant tuberculosis was
published in 2017, which comprehensively reviewed and provided recommendations on …

Whole genome sequencing Mycobacterium tuberculosis directly from sputum identifies more genetic diversity than sequencing from culture

C Nimmo, LP Shaw, R Doyle, R Williams, K Brien… - BMC genomics, 2019 - Springer
Background Repeated culture reduces within-sample Mycobacterium tuberculosis genetic
diversity due to selection of clones suited to growth in culture and/or random loss of …

Arrayed CRISPRi and quantitative imaging describe the morphotypic landscape of essential mycobacterial genes

TJ de Wet, KR Winkler, M Mhlanga, V Mizrahi… - Elife, 2020 - elifesciences.org
Mycobacterium tuberculosis possesses a large number of genes of unknown or predicted
function, undermining fundamental understanding of pathogenicity and drug susceptibility …

A Practical Approach for Predicting Antimicrobial Phenotype Resistance in Staphylococcus aureus Through Machine Learning Analysis of Genome Data

S Wang, C Zhao, Y Yin, F Chen, H Chen… - Frontiers in …, 2022 - frontiersin.org
With the reduction in sequencing price and acceleration of sequencing speed, it is
particularly important to directly link the genotype and phenotype of bacteria. Here, we firstly …

Application of mNGS in the etiological diagnosis of thoracic and abdominal infection in patients with end-stage liver disease

H Chen, Y Zhang, J Zheng, L Shi, Y He… - Frontiers in cellular …, 2022 - frontiersin.org
Background Despite the obvious advantages of metagenomic next-generation sequencing
(mNGS) in etiological diagnosis of various infectious diseases, there are few reports on …