The remarkable evolutionary plasticity of coronaviruses by mutation and recombination: insights for the COVID-19 pandemic and the future evolutionary paths of …

GD Amoutzias, M Nikolaidis, E Tryfonopoulou… - Viruses, 2022 - mdpi.com
Coronaviruses (CoVs) constitute a large and diverse subfamily of positive-sense single-
stranded RNA viruses. They are found in many mammals and birds and have great …

[PDF][PDF] The neighborhood of the spike gene is a hotspot for modular intertypic homologous and nonhomologous recombination in coronavirus genomes

M Nikolaidis, P Markoulatos… - Molecular biology …, 2022 - academic.oup.com
Coronaviruses (CoVs) have very large RNA viral genomes with a distinct genomic
architecture of core and accessory open reading frames (ORFs). It is of utmost importance to …

Recent progress in torovirus molecular biology

M Ujike, F Taguchi - Viruses, 2021 - mdpi.com
Torovirus (ToV) has recently been classified into the new family Tobaniviridae, although it
belonged to the Coronavirus (CoV) family historically. ToVs are associated with enteric …

Development of a TaqMan-probe-based multiplex real-time PCR for the simultaneous detection of emerging and reemerging swine coronaviruses

Z Pan, J Lu, N Wang, WT He, L Zhang, W Zhao, S Su - Virulence, 2020 - Taylor & Francis
With the outbreak of the recent severe acute respiratory syndrome coronavirus 2 (SARS-
CoV-2) in 2019, coronaviruses have become a global research hotspot in the field of …

A multiplex real-time fluorescence-based quantitative PCR assay for calf diarrhea viruses

W Meng, Z Chen, Q Jiang, J Chen, X Guo… - Frontiers in …, 2024 - frontiersin.org
Introduction Calf diarrhea is a significant condition that has a strong effect on the cattle
industry, resulting in huge economic losses annually. Bovine torovirus (BToV), bovine …

Detection and genetic characterization of enteric viruses in diarrhoea outbreaks from swine farms in Spain

H Puente, H Arguello, M Cortey… - Porcine Health …, 2023 - Springer
Background The aim of this work was to study the prevalence and distribution of Porcine
astrovirus (PAstV), Porcine kobuvirus (PKoV), Porcine torovirus (PToV), Mammalian …

Serpentoviruses: more than respiratory pathogens

E Dervas, J Hepojoki, T Smura, B Prähauser… - Journal of …, 2020 - Am Soc Microbiol
In recent years, nidoviruses have emerged as important respiratory pathogens of reptiles,
affecting captive python populations. In pythons, nidovirus (recently reclassified as …

Protein nucleotidylylation in+ ssRNA viruses

AR Eruera, AM McSweeney, GM McKenzie-Goldsmith… - Viruses, 2021 - mdpi.com
Nucleotidylylation is a post-transcriptional modification important for replication in the
picornavirus supergroup of RNA viruses, including members of the Caliciviridae …

Classification, replication, and transcription of Nidovirales

Y Liao, H Wang, H Liao, Y Sun, L Tan, C Song… - Frontiers in …, 2024 - frontiersin.org
Nidovirales is one order of RNA virus, with the largest single-stranded positive sense RNA
genome enwrapped with membrane envelope. It comprises four families (Arterividae …

Architecture of torovirus replicative organelles

G Ávila‐Pérez, MT Rejas, FJ Chichón… - Molecular …, 2022 - Wiley Online Library
Plus‐stranded RNA viruses replicate in the cytosol of infected cells, in membrane‐bound
replication complexes. We previously identified double membrane vesicles (DMVs) in the …