[HTML][HTML] Construction of habitat-specific training sets to achieve species-level assignment in 16S rRNA gene datasets
I F. Escapa, Y Huang, T Chen, M Lin, A Kokaras… - Microbiome, 2020 - Springer
Background The low cost of 16S rRNA gene sequencing facilitates population-scale
molecular epidemiological studies. Existing computational algorithms can resolve 16S rRNA …
molecular epidemiological studies. Existing computational algorithms can resolve 16S rRNA …
Respiratory microbiota resistance and resilience to pulmonary exacerbation and subsequent antimicrobial intervention
Pulmonary symptoms in cystic fibrosis (CF) begin in early life with chronic lung infections
and concomitant airway inflammation leading to progressive loss of lung function. Gradual …
and concomitant airway inflammation leading to progressive loss of lung function. Gradual …
Insights in the ecology and evolutionary history of the Miscellaneous Crenarchaeotic Group lineage
M Fillol, JC Auguet, EO Casamayor… - The ISME …, 2016 - academic.oup.com
Members of the archaeal Miscellaneous Crenarchaeotic Group (MCG) are among the most
successful microorganisms on the planet. During its evolutionary diversification, this very …
successful microorganisms on the planet. During its evolutionary diversification, this very …
Microbial biofilms: impact on the pathogenesis of periodontitis, cystic fibrosis, chronic wounds and medical device-related infections
M Madalina Mihai, A Maria Holban… - Current topics in …, 2015 - ingentaconnect.com
The majority of chronic infections are associated with mono-or polymicrobial biofilms, having
a significant impact on the patients' quality of life and survival rates. Although the use of …
a significant impact on the patients' quality of life and survival rates. Although the use of …
Cystic fibrosis therapy: a community ecology perspective
D Conrad, M Haynes, P Salamon… - American journal of …, 2013 - atsjournals.org
Current therapy for cystic fibrosis (CF) focuses on minimizing the microbial community and
the host's immune response through the aggressive use of airway clearance techniques …
the host's immune response through the aggressive use of airway clearance techniques …
Microbiota abnormalities in inflammatory airway diseases—Potential for therapy
ES Gollwitzer, BJ Marsland - Pharmacology & therapeutics, 2014 - Elsevier
Increasingly the development of novel therapeutic strategies is taking into consideration the
contribution of the intestinal microbiota to health and disease. Dysbiosis of the microbial …
contribution of the intestinal microbiota to health and disease. Dysbiosis of the microbial …
Respiratory microbiota: addressing clinical questions, informing clinical practice
Over the last decade, technological advances have revolutionised efforts to understand the
role played by microbes in airways disease. With the application of ever more sophisticated …
role played by microbes in airways disease. With the application of ever more sophisticated …
[HTML][HTML] Deciphering the ecology of cystic fibrosis bacterial communities: towards systems-level integration
A Bevivino, G Bacci, P Drevinek, MT Nelson… - Trends in molecular …, 2019 - cell.com
Despite over a decade of cystic fibrosis (CF) microbiome research, much remains to be
learned about the overall composition, metabolic activities, and pathogenicity of the …
learned about the overall composition, metabolic activities, and pathogenicity of the …
[HTML][HTML] Comprehensive analysis of secondary dental root canal infections: a combination of culture and culture-independent approaches reveals new insights
AC Anderson, E Hellwig, R Vespermann, A Wittmer… - PloS one, 2012 - journals.plos.org
Persistence of microorganisms or reinfections are the main reasons for failure of root canal
therapy. Very few studies to date have included culture-independent methods to assess the …
therapy. Very few studies to date have included culture-independent methods to assess the …
[HTML][HTML] Commensal Bacteria in the Cystic Fibrosis Airway Microbiome Reduce P. aeruginosa Induced Inflammation
A Tony-Odigie, L Wilke, S Boutin… - Frontiers in Cellular and …, 2022 - frontiersin.org
Chronic Pseudomonas aeruginosa infections play an important role in the progress of lung
disease in patients suffering from cystic fibrosis (CF). Recent studies indicate that …
disease in patients suffering from cystic fibrosis (CF). Recent studies indicate that …