Determinants and implications of mRNA poly (A) tail size–does this protein make my tail look big?

AL Jalkanen, SJ Coleman, J Wilusz - Seminars in cell & developmental …, 2014 - Elsevier
While the phenomenon of polyadenylation has been well-studied, the dynamics of poly (A)
tail size and its impact on transcript function and cell biology are less well-appreciated. The …

Circadian control of mRNA polyadenylation dynamics regulates rhythmic protein expression

S Kojima, EL Sher-Chen, CB Green - Genes & development, 2012 - genesdev.cshlp.org
Poly (A) tails are 3′ modifications of eukaryotic mRNAs that are important in the control of
translation and mRNA stability. We identified hundreds of mouse liver mRNAs that exhibit …

ePAT: a simple method to tag adenylated RNA to measure poly (A)-tail length and other 3′ RACE applications

A Jänicke, J Vancuylenberg, PR Boag, A Traven… - Rna, 2012 - rnajournal.cshlp.org
The addition of a poly (A)-tail to the 3′ termini of RNA molecules influences stability,
nuclear export, and efficiency of translation. In the cytoplasm, dynamic changes in the length …

microRNA-mediated messenger RNA deadenylation contributes to translational repression in mammalian cells

TH Beilharz, DT Humphreys, JL Clancy, R Thermann… - PloS one, 2009 - journals.plos.org
Animal microRNAs (miRNAs) typically regulate gene expression by binding to partially
complementary target sites in the 3′ untranslated region (UTR) of messenger RNA (mRNA) …

PAT-seq: a method to study the integration of 3′-UTR dynamics with gene expression in the eukaryotic transcriptome

PF Harrison, DR Powell, JL Clancy, T Preiss, PR Boag… - Rna, 2015 - rnajournal.cshlp.org
A major objective of systems biology is to quantitatively integrate multiple parameters from
genome-wide measurements. To integrate gene expression with dynamics in poly (A) tail …

TDP-43 regulates β-adducin (Add2) transcript stability

L Costessi, F Porro, A Iaconcig, AF Muro - RNA biology, 2014 - Taylor & Francis
TDP-43 is an RNA-binding protein involved in several steps of mRNA metabolism including
transcription, splicing and stability. It is also involved in ALS and FTD, neurodegenerative …

Thiamine metabolism genes in diatoms are not regulated by thiamine despite the presence of predicted riboswitches

M Llavero‐Pasquina, K Geisler, A Holzer… - New …, 2022 - Wiley Online Library
Thiamine pyrophosphate (TPP), an essential co‐factor for all species, is biosynthesised
through a metabolically expensive pathway regulated by TPP riboswitches in bacteria, fungi …

Global profiling of stimulus-induced polyadenylation in cells using a poly (A) trap

D Curanovic, M Cohen, I Singh, CE Slagle… - Nature chemical …, 2013 - nature.com
Polyadenylation of mRNA leads to increased protein expression in response to diverse
stimuli, but it is difficult to identify mRNAs that become polyadenylated in living cells. Here …

Characterization of the role of hexamer AGUAAA and poly (A) tail in coronavirus polyadenylation

YH Peng, CH Lin, CN Lin, CY Lo, TL Tsai, HY Wu - PLoS One, 2016 - journals.plos.org
Similar to eukaryotic mRNA, the positive-strand coronavirus genome of~ 30 kilobases is 5'-
capped and 3'-polyadenylated. It has been demonstrated that the length of the coronaviral …

[HTML][HTML] Arginase 2 and nitric oxide synthase: Pathways associated with the pathogenesis of thyroid tumors

MSA Sousa, FRM Latini, HP Monteiro… - Free Radical Biology and …, 2010 - Elsevier
We have previously shown that ARG2 expression was increased in most malignant thyroid
tumors, but absent in benign lesions and normal tissues. Small interfering RNA knockdown …