Strain-level epidemiology of microbial communities and the human microbiome
The biological importance and varied metabolic capabilities of specific microbial strains
have long been established in the scientific community. Strains have, in the past, been …
have long been established in the scientific community. Strains have, in the past, been …
Clinical detection and characterization of bacterial pathogens in the genomics era
PE Fournier, G Dubourg, D Raoult - Genome medicine, 2014 - Springer
The availability of genome sequences obtained using next-generation sequencing (NGS)
has revolutionized the field of infectious diseases. Indeed, more than 38,000 bacterial and …
has revolutionized the field of infectious diseases. Indeed, more than 38,000 bacterial and …
Single-molecule sequencing to track plasmid diversity of hospital-associated carbapenemase-producing Enterobacteriaceae
S Conlan, PJ Thomas, C Deming, M Park… - Science translational …, 2014 - science.org
Public health officials have raised concerns that plasmid transfer between
Enterobacteriaceae species may spread resistance to carbapenems, an antibiotic class of …
Enterobacteriaceae species may spread resistance to carbapenems, an antibiotic class of …
[HTML][HTML] Acinetobacter baumannii: epidemiological and beta-lactamase data from two tertiary academic hospitals in Tshwane, South Africa
Acinetobacter baumannii is an opportunistic pathogen that is increasingly responsible for
hospital-acquired infections. The increasing prevalence of carbapenem resistant A …
hospital-acquired infections. The increasing prevalence of carbapenem resistant A …
Hospital water and opportunities for infection prevention
BK Decker, TN Palmore - Current infectious disease reports, 2014 - Springer
Nosocomial waterborne pathogens may reach patients through several modes of
transmission. Colonization of healthcare facility waterworks can occur in the proximal …
transmission. Colonization of healthcare facility waterworks can occur in the proximal …
Genomics and metagenomics in medical microbiology
Over the last two decades, sequencing tools have evolved from laborious time-consuming
methodologies to real-time detection and deciphering of genomic DNA. Genome …
methodologies to real-time detection and deciphering of genomic DNA. Genome …
Genetic Variability of AdeRS Two-Component System Associated with Tigecycline Resistance in XDR-Acinetobacter baumannii Isolates
S Montana, E Vilacoba, GM Traglia, M Almuzara… - Current …, 2015 - Springer
The emergence of tigecycline resistance has increased in the last years. Although
tigecycline-resistant Acinetobacter baumannii isolates were described all over the world, few …
tigecycline-resistant Acinetobacter baumannii isolates were described all over the world, few …
Real-time PCR method for qualitative and quantitative detection of Lactobacillus sakei group species targeting novel markers based on bioinformatics analysis
E Kim, SM Yang, D Kim, HY Kim - International Journal of Food …, 2021 - Elsevier
Latilactobacillus sakei group comprises four closely related species, making it difficult to
accurately distinguish them with standard markers such as the 16S rRNA gene. The …
accurately distinguish them with standard markers such as the 16S rRNA gene. The …
Genomic epidemiology of multidrug‐resistant Gram‐negative organisms
SE Hawken, ES Snitkin - Annals of the New York Academy of …, 2019 - Wiley Online Library
The emergence and spread of antibiotic‐resistant Gram‐negative bacteria (rGNB) across
global healthcare networks presents a significant threat to public health. As the number of …
global healthcare networks presents a significant threat to public health. As the number of …
Widespread dispersion of the resistance element tet (B):: ISCR2 in XDR Acinetobacter baumannii isolates
E Vilacoba, M Almuzara, L Gulone… - Epidemiology & …, 2016 - cambridge.org
Acinetobacter baumannii is a significant nosocomial pathogen often associated with
extreme drug resistance (XDR). In Argentina, isolates of A. baumannii resistant to …
extreme drug resistance (XDR). In Argentina, isolates of A. baumannii resistant to …