[HTML][HTML] SCENIC+: single-cell multiomic inference of enhancers and gene regulatory networks
C Bravo González-Blas, S De Winter, G Hulselmans… - Nature …, 2023 - nature.com
Joint profiling of chromatin accessibility and gene expression in individual cells provides an
opportunity to decipher enhancer-driven gene regulatory networks (GRNs). Here we present …
opportunity to decipher enhancer-driven gene regulatory networks (GRNs). Here we present …
[HTML][HTML] Integrated proteogenomic characterization across major histological types of pediatric brain cancer
We report a comprehensive proteogenomics analysis, including whole-genome sequencing,
RNA sequencing, and proteomics and phosphoproteomics profiling, of 218 tumors across 7 …
RNA sequencing, and proteomics and phosphoproteomics profiling, of 218 tumors across 7 …
Cell type annotation of single-cell chromatin accessibility data via supervised Bayesian embedding
Recent advances in single-cell technologies have enabled the characterization of
epigenomic heterogeneity at the cellular level. Computational methods for automatic cell …
epigenomic heterogeneity at the cellular level. Computational methods for automatic cell …
A comparative atlas of single-cell chromatin accessibility in the human brain
Recent advances in single-cell transcriptomics have illuminated the diverse neuronal and
glial cell types within the human brain. However, the regulatory programs governing cell …
glial cell types within the human brain. However, the regulatory programs governing cell …
[HTML][HTML] Clemastine Promotes Differentiation of Oligodendrocyte Progenitor Cells Through the Activation of ERK1/2 via Muscarinic Receptors After Spinal Cord Injury
LY Tong, YB Deng, WH Du, WZ Zhou… - Frontiers in …, 2022 - frontiersin.org
The recovery of spinal cord injury (SCI) is closely associated with the obstruction of
oligodendrocyte progenitor cell (OPC) differentiation, which ultimately induces the inability to …
oligodendrocyte progenitor cell (OPC) differentiation, which ultimately induces the inability to …
Using a comprehensive atlas and predictive models to reveal the complexity and evolution of brain-active regulatory elements
Most genetic variants associated with psychiatric disorders are located in noncoding regions
of the genome. To investigate their functional implications, we integrate epigenetic data from …
of the genome. To investigate their functional implications, we integrate epigenetic data from …
Transcription factor Zfp276 drives oligodendroglial differentiation and myelination by switching off the progenitor cell program
T Aberle, S Piefke, S Hillgärtner, ER Tamm… - Nucleic acids …, 2022 - academic.oup.com
In oligodendrocytes of the vertebrate central nervous system a complex network of
transcriptional regulators is required to ensure correct and timely myelination of neuronal …
transcriptional regulators is required to ensure correct and timely myelination of neuronal …
[HTML][HTML] Effect of Clemastine on neurophysiological outcomes in an ovine model of neonatal hypoxic-ischemic encephalopathy
JK Mike, Y White, RS Hutchings, C Vento, J Ha… - Children, 2023 - mdpi.com
Originally approved by the US Food and Drug Administration (FDA) for its antihistamine
properties, clemastine can also promote white matter integrity and has shown promise in the …
properties, clemastine can also promote white matter integrity and has shown promise in the …
[HTML][HTML] Developmental landscape of human forebrain at a single-cell level identifies early waves of oligodendrogenesis
Oligodendrogenesis in the human central nervous system has been observed mainly at the
second trimester of gestation, a much later developmental stage compared to …
second trimester of gestation, a much later developmental stage compared to …
[HTML][HTML] Cell type-specific histone acetylation profiling of Alzheimer's disease subjects and integration with genetics
E Ramamurthy, G Welch, J Cheng, Y Yuan… - Frontiers in Molecular …, 2023 - frontiersin.org
We profile genome-wide histone 3 lysine 27 acetylation (H3K27ac) of 3 major brain cell
types from hippocampus and dorsolateral prefrontal cortex (dlPFC) of subjects with and …
types from hippocampus and dorsolateral prefrontal cortex (dlPFC) of subjects with and …