Splicing and transcription touch base: co-transcriptional spliceosome assembly and function

L Herzel, DSM Ottoz, T Alpert… - Nature reviews Molecular …, 2017 - nature.com
Several macromolecular machines collaborate to produce eukaryotic messenger RNA. RNA
polymerase II (Pol II) translocates along genes that are up to millions of base pairs in length …

Transcription termination and the control of the transcriptome: why, where and how to stop

O Porrua, D Libri - Nature reviews Molecular cell biology, 2015 - nature.com
Transcription termination occurs when the polymerase is released after a transcription event,
thus delimitating transcription units; however, the functional importance of termination …

mRNA recognition and packaging by the human transcription–export complex

B Pacheco-Fiallos, MK Vorländer, D Riabov-Bassat… - Nature, 2023 - nature.com
Newly made mRNAs are processed and packaged into mature ribonucleoprotein complexes
(mRNPs) and are recognized by the essential transcription–export complex (TREX) for …

[PDF][PDF] mRNA deadenylation is coupled to translation rates by the differential activities of Ccr4-Not nucleases

MW Webster, YH Chen, JAW Stowell, N Alhusaini… - Molecular cell, 2018 - cell.com
Translation and decay of eukaryotic mRNAs is controlled by shortening of the poly (A) tail
and release of the poly (A)-binding protein Pab1/PABP. The Ccr4-Not complex contains two …

U1 snRNP regulates chromatin retention of noncoding RNAs

Y Yin, JY Lu, X Zhang, W Shao, Y Xu, P Li, Y Hong… - Nature, 2020 - nature.com
Long noncoding RNAs (lncRNAs) and promoter-or enhancer-associated unstable
transcripts locate preferentially to chromatin, where some regulate chromatin structure …

Nuclear mRNPs are compact particles packaged with a network of proteins promoting RNA–RNA interactions

F Bonneau, J Basquin, B Steigenberger… - Genes & …, 2023 - genesdev.cshlp.org
Messenger RNAs (mRNAs) are at the center of the central dogma of molecular biology. In
eukaryotic cells, these long ribonucleic acid polymers do not exist as naked transcripts; …

The role of TREX in gene expression and disease

CG Heath, N Viphakone, SA Wilson - Biochemical Journal, 2016 - portlandpress.com
TRanscription and EXport (TREX) is a conserved multisubunit complex essential for
embryogenesis, organogenesis and cellular differentiation throughout life. By linking …

Short tRNA anticodon stem and mutant eRF1 allow stop codon reassignment

A Kachale, Z Pavlíková, A Nenarokova, A Roithová… - Nature, 2023 - nature.com
Cognate tRNAs deliver specific amino acids to translating ribosomes according to the
standard genetic code, and three codons with no cognate tRNAs serve as stop codons …

Control of mammalian gene expression by selective mRNA export

VO Wickramasinghe, RA Laskey - Nature reviews Molecular cell biology, 2015 - nature.com
Nuclear export of mRNAs is a crucial step in the regulation of gene expression, linking
transcription in the nucleus to translation in the cytoplasm. Although important components …

[PDF][PDF] Genetic codes with no dedicated stop codon: context-dependent translation termination

EC Swart, V Serra, G Petroni, M Nowacki - Cell, 2016 - cell.com
The prevailing view of the nuclear genetic code is that it is largely frozen and unambiguous.
Flexibility in the nuclear genetic code has been demonstrated in ciliates that reassign …